7E1K
Crystal structure of Pr55Gag-matrix domain in complex with IP6 in space group R32
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00540 | e7e1kA1 | A: alpha arrays | X: Retroviral matrix proteins (From Topology) | H: Retroviral matrix proteins (From Topology) | T: Retroviral matrix proteins | F: PF00540 | ECOD (1.6) |
B | PF00540 | e7e1kB1 | A: alpha arrays | X: Retroviral matrix proteins (From Topology) | H: Retroviral matrix proteins (From Topology) | T: Retroviral matrix proteins | F: PF00540 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00540 | gag gene protein p17 (matrix protein) (Gag_p17) | gag gene protein p17 (matrix protein) | The matrix protein forms an icosahedral shell associated with the inner membrane of the mature immunodeficiency virus. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Capsid protein p24 |
|
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000071 | Immunodeficiency lentiviral matrix, N-terminal | Domain | |
IPR045345 | Retroviral nucleocapsid Gag protein p24, C-terminal domain | Domain | |
IPR008919 | Retrovirus capsid, N-terminal | Homologous Superfamily | |
IPR010999 | Retroviral matrix protein | Homologous Superfamily | |
IPR012344 | Matrix protein, lentiviral and alpha-retroviral, N-terminal | Homologous Superfamily | |
IPR050195 | Primate lentivirus group Gag polyprotein | Family | |
IPR008916 | Retrovirus capsid, C-terminal | Homologous Superfamily |