7CPH
Crystal structure of tRNA adenosine deaminase from Bacillus subtilis
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d7cpha_ | Alpha and beta proteins (a/b) | Cytidine deaminase-like | Cytidine deaminase-like | automated matches | automated matches | (Bacillus subtilis subsp. subtilis str. 168 ) [TaxId: 224308 ], | SCOPe (2.08) |
B | d7cphb1 | Alpha and beta proteins (a/b) | Cytidine deaminase-like | Cytidine deaminase-like | automated matches | automated matches | (Bacillus subtilis subsp. subtilis str. 168 ) [TaxId: 224308 ], | SCOPe (2.08) |
B | d7cphb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Bacillus subtilis subsp. subtilis str. 168 ) [TaxId: 224308 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Deoxycytidylate deaminase-like | 8103381 | 4000564 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Cytidine deaminase-like | 8103382 | 3001838 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Cytidine deaminase-like | 8103382 | 3001838 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | dCMP_cyt_deam_1 | e7cphA1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: dCMP_cyt_deam_1 | ECOD (1.6) |
B | dCMP_cyt_deam_1 | e7cphB1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: dCMP_cyt_deam_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00383 | Cytidine and deoxycytidylate deaminase zinc-binding region (dCMP_cyt_deam_1) | Cytidine and deoxycytidylate deaminase zinc-binding region | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002125 | Cytidine and deoxycytidylate deaminase domain | Domain | |
IPR028883 | tRNA-specific adenosine deaminase | Family | |
IPR016192 | APOBEC/CMP deaminase, zinc-binding | Binding Site | |
IPR016193 | Cytidine deaminase-like | Homologous Superfamily |