7C1C
Crystal structure of FumaraseC from Mannheimia succiniciproducens
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d7c1ca_ | All alpha proteins | L-aspartase-like | L-aspartase-like | L-aspartase/fumarase | automated matches | ([Mannheimia] succiniciproducens MBEL55E ) [TaxId: 221988 ], | SCOPe (2.08) |
B | d7c1cb_ | All alpha proteins | L-aspartase-like | L-aspartase-like | L-aspartase/fumarase | automated matches | ([Mannheimia] succiniciproducens MBEL55E ) [TaxId: 221988 ], | SCOPe (2.08) |
C | d7c1cc_ | All alpha proteins | L-aspartase-like | L-aspartase-like | L-aspartase/fumarase | automated matches | ([Mannheimia] succiniciproducens MBEL55E ) [TaxId: 221988 ], | SCOPe (2.08) |
D | d7c1cd_ | All alpha proteins | L-aspartase-like | L-aspartase-like | L-aspartase/fumarase | automated matches | ([Mannheimia] succiniciproducens MBEL55E ) [TaxId: 221988 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | L-aspartase-like | 8103172 | 3001572 | SCOP2B (2022-06-29) |
B | SCOP2 Family | L-aspartase/fumarase | 8103171 | 4001433 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | L-aspartase-like | 8103172 | 3001572 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | L-aspartase-like | 8103172 | 3001572 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | L-aspartase-like | 8103172 | 3001572 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Lyase_1_N | e7c1cA1 | A: alpha arrays | X: L-aspartase N-terminal domain-like (From Topology) | H: L-aspartase N-terminal domain-like (From Topology) | T: L-aspartase N-terminal domain-like | F: Lyase_1_N | ECOD (1.6) |
A | FumaraseC_C | e7c1cA3 | A: alpha arrays | X: L-aspartase C-terminal domain-like (From Homology) | H: L-aspartase C-terminal domain-like | T: L-aspartase C-terminal domain-like | F: FumaraseC_C | ECOD (1.6) |
A | Lyase_1_C | e7c1cA2 | A: alpha arrays | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like (From Topology) | T: L-aspartase middle domain-like | F: Lyase_1_C | ECOD (1.6) |
B | Lyase_1_N | e7c1cB1 | A: alpha arrays | X: L-aspartase N-terminal domain-like (From Topology) | H: L-aspartase N-terminal domain-like (From Topology) | T: L-aspartase N-terminal domain-like | F: Lyase_1_N | ECOD (1.6) |
B | FumaraseC_C | e7c1cB3 | A: alpha arrays | X: L-aspartase C-terminal domain-like (From Homology) | H: L-aspartase C-terminal domain-like | T: L-aspartase C-terminal domain-like | F: FumaraseC_C | ECOD (1.6) |
B | Lyase_1_C | e7c1cB2 | A: alpha arrays | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like (From Topology) | T: L-aspartase middle domain-like | F: Lyase_1_C | ECOD (1.6) |
C | Lyase_1_N | e7c1cC2 | A: alpha arrays | X: L-aspartase N-terminal domain-like (From Topology) | H: L-aspartase N-terminal domain-like (From Topology) | T: L-aspartase N-terminal domain-like | F: Lyase_1_N | ECOD (1.6) |
C | FumaraseC_C | e7c1cC1 | A: alpha arrays | X: L-aspartase C-terminal domain-like (From Homology) | H: L-aspartase C-terminal domain-like | T: L-aspartase C-terminal domain-like | F: FumaraseC_C | ECOD (1.6) |
C | Lyase_1_C | e7c1cC3 | A: alpha arrays | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like (From Topology) | T: L-aspartase middle domain-like | F: Lyase_1_C | ECOD (1.6) |
D | Lyase_1_N | e7c1cD1 | A: alpha arrays | X: L-aspartase N-terminal domain-like (From Topology) | H: L-aspartase N-terminal domain-like (From Topology) | T: L-aspartase N-terminal domain-like | F: Lyase_1_N | ECOD (1.6) |
D | FumaraseC_C | e7c1cD3 | A: alpha arrays | X: L-aspartase C-terminal domain-like (From Homology) | H: L-aspartase C-terminal domain-like | T: L-aspartase C-terminal domain-like | F: FumaraseC_C | ECOD (1.6) |
D | Lyase_1_C | e7c1cD2 | A: alpha arrays | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like (From Topology) | T: L-aspartase middle domain-like | F: Lyase_1_C | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00206 | Lyase (Lyase_1) | Lyase | - | Domain | |
PF10415 | Fumarase C C-terminus (FumaraseC_C) | Fumarase C C-terminus | Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Kreb's cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000362 | Fumarate lyase family | Family | |
IPR022761 | Fumarate lyase, N-terminal | Domain | |
IPR024083 | Fumarase/histidase, N-terminal | Homologous Superfamily | |
IPR005677 | Fumarate hydratase, class II | Family | |
IPR008948 | L-Aspartase-like | Homologous Superfamily | |
IPR018951 | Fumarase C, C-terminal | Domain | |
IPR020557 | Fumarate lyase, conserved site | Conserved Site |