7AY1
Cryo-EM structure of USP1-UAF1 bound to mono-ubiquitinated FANCD2, and FANCI
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | FANCI_S1 | e7ay1A1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: FANCI_S1 | ECOD (1.6) |
B | FancD2 | e7ay1B1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: FancD2 | ECOD (1.6) |
C | ubiquitin_1 | e7ay1C1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: ubiquitin_1 | ECOD (1.6) |
D | UCH | e7ay1D1 | A: a+b complex topology | X: Cysteine proteinases-like | H: Cysteine proteinases (From Topology) | T: Cysteine proteinases | F: UCH | ECOD (1.6) |
E | ANAPC4_WD40_18 | e7ay1E2 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: ANAPC4_WD40_18 | ECOD (1.6) |
E | KOG0308 | e7ay1E1 | A: beta duplicates or obligate multimers | X: WD repeat-containing protein 48 ancillary domain (From Topology) | H: WD repeat-containing protein 48 ancillary domain (From Topology) | T: WD repeat-containing protein 48 ancillary domain | F: KOG0308 | ECOD (1.6) |
E | DUF3337 | e7ay1E3 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: DUF3337 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14676 | FANCI solenoid 2 (FANCI_S2) | FANCI solenoid 2 | - | Repeat | |
PF14677 | FANCI solenoid 3 (FANCI_S3) | FANCI solenoid 3 | - | Repeat | |
PF14678 | FANCI solenoid 4 (FANCI_S4) | FANCI solenoid 4 | - | Repeat | |
PF14679 | FANCI helical domain 1 (FANCI_HD1) | FANCI helical domain 1 | - | Repeat | |
PF00240 | Ubiquitin family (ubiquitin) | Ubiquitin family | This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ... | Domain | |
PF00443 | Ubiquitin carboxyl-terminal hydrolase (UCH) | Ubiquitin carboxyl-terminal hydrolase | - | Family | |
PF11816 | Domain of unknown function (DUF3337) (DUF3337) | Domain of unknown function (DUF3337) | - | Family | |
PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat | |