7AAK
Human porphobilinogen deaminase R173W mutant crystallized in the ES2 intermediate state
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF03900 | e7aakA1 | A: a+b two layers | X: dsRBD-like | H: Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain (From Topology) | T: Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain | F: PF03900 | ECOD (1.6) |
A | PF01379 | e7aakA2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: PF01379 | ECOD (1.6) |
B | PF03900 | e7aakB1 | A: a+b two layers | X: dsRBD-like | H: Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain (From Topology) | T: Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain | F: PF03900 | ECOD (1.6) |
B | PF01379 | e7aakB2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: PF01379 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03900 | Porphobilinogen deaminase, C-terminal domain (Porphobil_deamC) | Porphobilinogen deaminase, C-terminal domain | - | Domain | |
PF01379 | Porphobilinogen deaminase, dipyromethane cofactor binding domain (Porphobil_deam) | Porphobilinogen deaminase, dipyromethane cofactor binding domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR022418 | Porphobilinogen deaminase, C-terminal | Domain | |
IPR000860 | Porphobilinogen deaminase | Family | |
IPR022419 | Porphobilinogen deaminase, dipyrromethane cofactor binding site | Binding Site | |
IPR036803 | Porphobilinogen deaminase, C-terminal domain superfamily | Homologous Superfamily | |
IPR022417 | Porphobilinogen deaminase, N-terminal | Domain |