6ZPL
Inward-open structure of human glycine transporter 1 in complex with a benzoylisoindoline inhibitor, sybody Sb_GlyT1#7 and bound Na and Cl ions.
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PF00209 | e6zplB1 | A: alpha complex topology | X: Sodium:neurotransmitter symporter family (SNF)-like (From Topology) | H: Sodium:neurotransmitter symporter family (SNF)-like (From Topology) | T: Sodium:neurotransmitter symporter family (SNF)-like | F: PF00209 | ECOD (1.6) |
B [auth A] | PF00209 | e6zplA1 | A: alpha complex topology | X: Sodium:neurotransmitter symporter family (SNF)-like (From Topology) | H: Sodium:neurotransmitter symporter family (SNF)-like (From Topology) | T: Sodium:neurotransmitter symporter family (SNF)-like | F: PF00209 | ECOD (1.6) |
C | PF02156 | e6zplC1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF02156 | ECOD (1.6) |
D [auth E] | PF07686 | e6zplE1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
E [auth F] | PF07686 | e6zplF1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02156 | Glycosyl hydrolase family 26 (Glyco_hydro_26) | Glycosyl hydrolase family 26 | - | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth A] | IPR000175 | Sodium:neurotransmitter symporter | Family |
A [auth B], B [auth A] | IPR003028 | Sodium:neurotransmitter symporter, glycine, type 1 | Family |
A [auth B], B [auth A] | IPR037272 | Sodium:neurotransmitter symporter superfamily | Homologous Superfamily |
IPR002105 | Dockerin type I repeat | Repeat | |
IPR005087 | Carbohydrate binding module family 11 | Domain | |
IPR016134 | Dockerin domain | Domain | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR001547 | Glycoside hydrolase, family 5 | Domain | |
IPR008979 | Galactose-binding-like domain superfamily | Homologous Superfamily | |
IPR050386 | Glycosyl Hydrolase 5 (Cellulase A) | Family | |
IPR036439 | Dockerin domain superfamily | Homologous Superfamily | |
IPR022790 | Glycosyl hydrolase family 26 domain | Domain | |
IPR018087 | Glycoside hydrolase, family 5, conserved site | Conserved Site |
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | APC (Amino acid-Polyamine-organoCation) superfamily | Neurotransmitter: sodium symporter |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |