6ZMB
Structure of the native tRNA-Monooxygenase enzyme MiaE
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | d6zmbb_ | All alpha proteins | Ferritin-like | Ferritin-like | MiaE-like | Putative tRNA-(Ms(2)io(6)a)-hydroxylase PP2188 | (Pseudomonas putida KT2440 ) [TaxId: 160488 ], | SCOPe (2.08) |
B [auth C] | d6zmbc_ | All alpha proteins | Ferritin-like | Ferritin-like | MiaE-like | Putative tRNA-(Ms(2)io(6)a)-hydroxylase PP2188 | (Pseudomonas putida KT2440 ) [TaxId: 160488 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | Ferritin-like | 8096398 | 3001658 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2 Family | MiaE-like | 8096397 | 4001288 | SCOP2 (2022-06-29) |
B [auth C] | SCOP2 Superfamily | Ferritin-like | 8096398 | 3001658 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | MiaE | e6zmbB1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: MiaE | ECOD (1.6) |
B [auth C] | MiaE | e6zmbC1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: MiaE | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth C] | PF06175 | tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) (MiaE) | tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) | This family consists of several bacterial tRNA-(MS(2)IO(6)A)-hydroxylase (MiaE) proteins. The modified nucleoside 2-methylthio-N-6-isopentenyl adenosine (ms2i6A) is present at position 37 (3' of the anticodon) of tRNAs that read codons beginning with ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth C] | IPR012347 | Ferritin-like | Homologous Superfamily |
A [auth B], B [auth C] | IPR009078 | Ferritin-like superfamily | Homologous Superfamily |
A [auth B], B [auth C] | IPR010386 | tRNA-hydroxylase MiaE | Family |