6Z5J
Arrangement of the matrix protein M1 in influenza A/Hong Kong/1/1968 VLPs (HA,NA,M1,M2)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth F] | SCOP2B Superfamily | Influenza virus matrix protein M1-like | 8097730 | 3000900 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | Influenza virus matrix protein M1-like | 8097730 | 3000900 | SCOP2B (2022-06-29) |
A [auth E] | SCOP2B Superfamily | Influenza virus matrix protein M1-like | 8097730 | 3000900 | SCOP2B (2022-06-29) |
D [auth C] | SCOP2 Family | Influenza virus matrix protein M1 | 8097729 | 4001140 | SCOP2 (2022-06-29) |
D [auth C] | SCOP2 Superfamily | Influenza virus matrix protein M1-like | 8097730 | 3000900 | SCOP2 (2022-06-29) |
E [auth B] | SCOP2B Superfamily | Influenza virus matrix protein M1-like | 8097730 | 3000900 | SCOP2B (2022-06-29) |
F [auth A] | SCOP2B Superfamily | Influenza virus matrix protein M1-like | 8097730 | 3000900 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth F] | Flu_M1 | e6z5jF1 | A: alpha complex topology | X: Influenza virus matrix protein M1 (From Topology) | H: Influenza virus matrix protein M1 (From Topology) | T: Influenza virus matrix protein M1 | F: Flu_M1 | ECOD (1.6) |
C [auth D] | Flu_M1 | e6z5jD1 | A: alpha complex topology | X: Influenza virus matrix protein M1 (From Topology) | H: Influenza virus matrix protein M1 (From Topology) | T: Influenza virus matrix protein M1 | F: Flu_M1 | ECOD (1.6) |
A [auth E] | Flu_M1 | e6z5jE1 | A: alpha complex topology | X: Influenza virus matrix protein M1 (From Topology) | H: Influenza virus matrix protein M1 (From Topology) | T: Influenza virus matrix protein M1 | F: Flu_M1 | ECOD (1.6) |
D [auth C] | Flu_M1 | e6z5jC1 | A: alpha complex topology | X: Influenza virus matrix protein M1 (From Topology) | H: Influenza virus matrix protein M1 (From Topology) | T: Influenza virus matrix protein M1 | F: Flu_M1 | ECOD (1.6) |
E [auth B] | Flu_M1 | e6z5jB1 | A: alpha complex topology | X: Influenza virus matrix protein M1 (From Topology) | H: Influenza virus matrix protein M1 (From Topology) | T: Influenza virus matrix protein M1 | F: Flu_M1 | ECOD (1.6) |
F [auth A] | Flu_M1 | e6z5jA1 | A: alpha complex topology | X: Influenza virus matrix protein M1 (From Topology) | H: Influenza virus matrix protein M1 (From Topology) | T: Influenza virus matrix protein M1 | F: Flu_M1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08289 | Influenza Matrix protein (M1) C-terminal domain (Flu_M1_C) | Influenza Matrix protein (M1) C-terminal domain | This region is thought to be a second domain of the M1 matrix protein. | Domain | |
PF00598 | Influenza Matrix protein (M1) (Flu_M1) | Influenza Matrix protein (M1) | This protein forms a continuous shell on the inner side of the lipid bilayer, but its function is unclear. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR015799 | Influenza matrix M1, N-terminal subdomain 2 | Homologous Superfamily | |
IPR015423 | Influenza matrix M1, N-terminal subdomain 1 | Homologous Superfamily | |
IPR036039 | Influenza virus matrix protein M1 | Homologous Superfamily | |
IPR013188 | Influenza matrix M1, C-terminal | Domain | |
IPR001561 | Influenza matrix M1, N-terminal | Domain | |
IPR037533 | Matrix protein 1 | Family |