6YQH

GH146 beta-L-arabinofuranosidase bound to covalent inhibitor

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth AAA]	PF16375	e6yqhAAA2	A: beta barrels	X: Glycoside hydrolase family 127 C-terminal domain (From Topology)	H: Glycoside hydrolase family 127 C-terminal domain (From Topology)	T: Glycoside hydrolase family 127 C-terminal domain	F: PF16375	ECOD (1.6)
A [auth AAA]	PF20620	e6yqhAAA4	A: beta sandwiches	X: jelly-roll	H: Galactose-binding domain-like (From Topology)	T: Galactose-binding domain-like	F: PF20620	ECOD (1.6)
A [auth AAA]	PF20736	e6yqhAAA1	A: beta sandwiches	X: Glycosyl hydrolase domain-like	H: Glycoside hydrolase family 127 middle domain-related (From Topology)	T: Glycoside hydrolase family 127 middle domain-related	F: PF20736	ECOD (1.6)
A [auth AAA]	PF07944	e6yqhAAA3	A: alpha superhelices	X: Repetitive alpha hairpins	H: alpha/alpha toroid (From Topology)	T: alpha/alpha toroid	F: PF07944	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth AAA]	PF16375	Domain of unknown function (DUF4986)	Domain of unknown function	This domain is found in Rhamnogalacturonan lyase from Bacteroides thetaiotaomicron (Swiss:Q8AAW3) and other bacterial proteins. It shows an alpha/beta structure [1] and locates C-terminal to Pfam:PF07944. The specific function of this domain is still ...	This domain is found in Rhamnogalacturonan lyase from Bacteroides thetaiotaomicron (Swiss:Q8AAW3) and other bacterial proteins. It shows an alpha/beta structure [1] and locates C-terminal to Pfam:PF07944. The specific function of this domain is still unknown.	Domain
A [auth AAA]	PF07944	Beta-L-arabinofuranosidase, GH127 catalytic domain (Beta-AFase-like_GH127_cat)	Beta-L-arabinofuranosidase, GH127 catalytic domain	-	Repeat
A [auth AAA]	PF20736	Beta-L-arabinofuranosidase, GH127 middle domain (Glyco_hydro127M)	Beta-L-arabinofuranosidase, GH127 middle domain	This entry represents the first of two beta sandwich domains found in the beta-L-arabinofuranosidase enzyme, EC:3.2.1.185 [1]. This domain shows a similarity to C-terminal domains of GH44, GH27, and GH39 enzymes [1].	Domain
A [auth AAA]	PF20620	Family of unknown function (DUF6805) (DUF6805)	Family of unknown function (DUF6805)	This presumed domain is functionally uncharacterised. This domain family is found in bacteria, and is approximately 130 amino acids in length. The family is found in association with Pfam:PF07944, Pfam:PF16375.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth AAA]	Acetyl-CoA carboxylase, biotin carboxylase	cation binding ion binding binding metal ion binding small molecule binding	carbohydrate metabolic process primary metabolic process metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth AAA]	IPR049046	Non-reducing end beta-L-arabinofuranosidase-like, GH127 middle domain	Domain
A [auth AAA]	IPR008928	Six-hairpin glycosidase superfamily	Homologous Superfamily
A [auth AAA]	IPR032275	Domain of unknown function DUF4986	Domain
A [auth AAA]	IPR046544	Glycoside hydrolase GH146, substrate-binding domain	Domain
A [auth AAA]	IPR012878	Non-reducing end beta-L-arabinofuranosidase-like, GH127 catalytic domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.