6YI5
In-situ structure of the trimeric HEF from influenza C by flexible fitting into a cryo-ET map.
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | SGNH hydrolase-like | 8044118 | 3001315 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Influenza hemagglutinin domain-like | 8041200 | 3001342 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | SGNH hydrolase-like | 8044118 | 3001315 | SCOP2B (2022-06-29) |
C [auth E] | SCOP2B Superfamily | Influenza hemagglutinin domain-like | 8041200 | 3001342 | SCOP2B (2022-06-29) |
C [auth E] | SCOP2B Superfamily | SGNH hydrolase-like | 8044118 | 3001315 | SCOP2B (2022-06-29) |
C [auth E] | SCOP2B Superfamily | SGNH hydrolase-like | 8044118 | 3001315 | SCOP2B (2022-06-29) |
E [auth C] | SCOP2B Superfamily | Influenza hemagglutinin domain-like | 8041200 | 3001342 | SCOP2B (2022-06-29) |
E [auth C] | SCOP2B Superfamily | SGNH hydrolase-like | 8044118 | 3001315 | SCOP2B (2022-06-29) |
E [auth C] | SCOP2B Superfamily | SGNH hydrolase-like | 8044118 | 3001315 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Influenza hemagglutinin (stalk) | 8039592 | 3001616 | SCOP2B (2022-06-29) |
D [auth F] | SCOP2B Superfamily | Influenza hemagglutinin (stalk) | 8039592 | 3001616 | SCOP2B (2022-06-29) |
F [auth D] | SCOP2B Superfamily | Influenza hemagglutinin (stalk) | 8039592 | 3001616 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Hema_esterase_2nd | e6yi5A1 | A: beta sandwiches | X: jelly-roll | H: Viral protein domain (From Topology) | T: Viral protein domain | F: Hema_esterase_2nd | ECOD (1.6) |
A | Hema_esterase_1st | e6yi5A2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: SGNH hydrolase (From Topology) | T: SGNH hydrolase | F: Hema_esterase_1st | ECOD (1.6) |
C [auth E] | Hema_esterase_2nd | e6yi5E1 | A: beta sandwiches | X: jelly-roll | H: Viral protein domain (From Topology) | T: Viral protein domain | F: Hema_esterase_2nd | ECOD (1.6) |
C [auth E] | Hema_esterase_1st | e6yi5E2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: SGNH hydrolase (From Topology) | T: SGNH hydrolase | F: Hema_esterase_1st | ECOD (1.6) |
E [auth C] | Hema_esterase_2nd | e6yi5C2 | A: beta sandwiches | X: jelly-roll | H: Viral protein domain (From Topology) | T: Viral protein domain | F: Hema_esterase_2nd | ECOD (1.6) |
E [auth C] | Hema_esterase_1st | e6yi5C1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: SGNH hydrolase (From Topology) | T: SGNH hydrolase | F: Hema_esterase_1st | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth E], E [auth C] | PF03996 | Hemagglutinin esterase (Hema_esterase) | Hemagglutinin esterase | - | Domain |
A, C [auth E], E [auth C] | PF02710 | Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein (Hema_HEFG) | Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein | - | Family |