6XU0
Archaeoglobus fulgidus Argonaute protein with DNA oligoduplex 5'-pATCGTGGCCACGAT
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Mid domain of argonaute | 8053603 | 3002210 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Ribonuclease H-like | 8033004 | 3000143 | SCOP2B (2022-06-29) |
D [auth B] | SCOP2B Superfamily | Mid domain of argonaute | 8053603 | 3002210 | SCOP2B (2022-06-29) |
D [auth B] | SCOP2B Superfamily | Ribonuclease H-like | 8033004 | 3000143 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Piwi_N_2 | e6xu0A2 | A: a/b three-layered sandwiches | X: Middle domain in Argonaute homologs (From Topology) | H: Middle domain in Argonaute homologs (From Topology) | T: Middle domain in Argonaute homologs | F: Piwi_N_2 | ECOD (1.6) |
A | Piwi_C_1 | e6xu0A1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Piwi_C_1 | ECOD (1.6) |
D [auth B] | Piwi_N_2 | e6xu0B2 | A: a/b three-layered sandwiches | X: Middle domain in Argonaute homologs (From Topology) | H: Middle domain in Argonaute homologs (From Topology) | T: Middle domain in Argonaute homologs | F: Piwi_N_2 | ECOD (1.6) |
D [auth B] | Piwi_C_1 | e6xu0B1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Piwi_C_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, D [auth B] | PF02171 | Piwi domain (Piwi) | Piwi domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, D [auth B] | Piwi protein | - | - | |
B [auth R], C [auth S], E [auth P], F [auth Q] | 5'-D(*AP*TP*CP*GP*TP*GP*GP*CP*CP*AP*CP*GP*AP*TP)-3' | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, D [auth B] | IPR036397 | Ribonuclease H superfamily | Homologous Superfamily |
A, D [auth B] | IPR003165 | Piwi domain | Domain |
A, D [auth B] | IPR012337 | Ribonuclease H-like superfamily | Homologous Superfamily |