6XJN
Human atlastin-1 (residues 1-439) bound to GDP-Mg2+ exhibits an ordered amino terminus
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | KOG2037 | e6xjnA2 | A: alpha bundles | X: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain (From Topology) | H: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain (From Topology) | T: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | F: KOG2037 | ECOD (1.6) |
A | MCM_AAA | e6xjnA1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02263 | Guanylate-binding protein, N-terminal domain (GBP) | Guanylate-binding protein, N-terminal domain | Transcription of the anti-viral guanylate-binding protein (GBP) is induced by interferon-gamma during macrophage induction. This family contains GBP1 and GPB2, both GTPases capable of binding GTP, GDP and GMP. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036543 | Guanylate-binding protein, C-terminal domain superfamily | Homologous Superfamily | |
IPR030386 | GB1/RHD3-type guanine nucleotide-binding (G) domain | Domain | |
IPR015894 | Guanylate-binding protein, N-terminal | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | MONOTOPIC MEMBRANE PROTEINS | Membrane-Shaping Proteins (monotopic) | Atlastin-1 GTPase (residues 1-439) bound to GDP-Mg2+ |