6XIR

Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative Stress


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
K [auth L]SCOP2B SuperfamilyRibosomal protein L13e-like 8053159 3002162 SCOP2B (2022-06-29)
M [auth N]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8082481 3000210 SCOP2B (2022-06-29)
N [auth O]SCOP2B SuperfamilyRibosomal protein L13 8066053 3001134 SCOP2B (2022-06-29)
O [auth P]SCOP2B SuperfamilyRibosomal protein L22 8076708 3001078 SCOP2B (2022-06-29)
P [auth Q]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8095970 3001045 SCOP2B (2022-06-29)
Q [auth R]SCOP2B SuperfamilyRibosomal protein L19 (L19e) 8077485 3000890 SCOP2B (2022-06-29)
T [auth U]SCOP2B Superfamily60S Ribosomal protein L22e 8053058 3002158 SCOP2B (2022-06-29)
U [auth V]SCOP2B Superfamily50S Ribosomal protein L14-like 8103364 3000433 SCOP2B (2022-06-29)
W [auth X]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8095962 3000210 SCOP2B (2022-06-29)
X [auth Y]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076760 3000334 SCOP2B (2022-06-29)
Y [auth Z]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053046 3000334 SCOP2B (2022-06-29)
Z [auth AA]SCOP2B SuperfamilyWinged helix DNA-binding domain 8055713 3000034 SCOP2B (2022-06-29)
AA [auth AB]SCOP2B SuperfamilyNucleic acid-binding proteins 8052738 3000135 SCOP2B (2022-06-29)
AA [auth AB]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like 8052736 3002138 SCOP2B (2022-06-29)
EA [auth a]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8077127 3001045 SCOP2B (2022-06-29)
GA [auth c]SCOP2B SuperfamilyL30e-like 8039862 3001739 SCOP2B (2022-06-29)
IA [auth e]SCOP2 FamilyRibosomal protein L32e 8102035 4003517 SCOP2 (2022-06-29)
IA [auth e]SCOP2 SuperfamilyRibosomal protein L32e 8102036 3000982 SCOP2 (2022-06-29)
JA [auth f]SCOP2B SuperfamilyTranslational proteins 8087451 3000811 SCOP2B (2022-06-29)
KA [auth g]SCOP2B SuperfamilyRibosomal protein L34e-like 8053547 3002203 SCOP2B (2022-06-29)
MA [auth i]SCOP2B SuperfamilyRibosomal protein L36e 8053115 3002161 SCOP2B (2022-06-29)
DSCOP2 FamilyRibosomal protein L5e and archael L18-like 8096937 4006591 SCOP2 (2022-06-29)
DSCOP2 SuperfamilyTranslational machinery components 8096938 3000571 SCOP2 (2022-06-29)
NA [auth j]SCOP2B SuperfamilyZn-binding ribosomal proteins 8080044 3001320 SCOP2B (2022-06-29)
PA [auth l]SCOP2B SuperfamilyRibosomal protein L39e 8078549 3001756 SCOP2B (2022-06-29)
SA [auth p]SCOP2B SuperfamilyZn-binding ribosomal proteins 8103126 3001320 SCOP2B (2022-06-29)
UA [auth q]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8061280 3001397 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053109 3000334 SCOP2B (2022-06-29)
YA [auth u]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8052760 3000334 SCOP2B (2022-06-29)
YA [auth u]SCOP2B SuperfamilyNucleic acid-binding proteins 8052759 3000135 SCOP2B (2022-06-29)
YA [auth u]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8052758 3001473 SCOP2B (2022-06-29)
ZA [auth v]SCOP2B SuperfamilyRibosomal protein S7 8065999 3000799 SCOP2B (2022-06-29)
AB [auth w]SCOP2B SuperfamilyGS N-terminal domain-like 8053173 3000408 SCOP2B (2022-06-29)
EB [auth AD]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8052974 3001284 SCOP2B (2022-06-29)
EB [auth AD]SCOP2B SuperfamilyHomeodomain-like 8052973 3000001 SCOP2B (2022-06-29)
FB [auth AE]SCOP2B SuperfamilyTranslational machinery components 8098660 3000571 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyRibosomal L30p/L7e protein, N-terminal domain-lke 8052916 3002152 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyRibosomal protein L30p/L7e 8052917 3001378 SCOP2B (2022-06-29)
HB [auth AG]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8103366 3000100 SCOP2B (2022-06-29)
JB [auth AI]SCOP2B SuperfamilyS13-like H2TH domain 8098450 3000053 SCOP2B (2022-06-29)
LB [auth AK]SCOP2 FamilyRibosomal protein S10 8096927 4001240 SCOP2 (2022-06-29)
LB [auth AK]SCOP2 SuperfamilyRibosomal protein S10 8096928 3001336 SCOP2 (2022-06-29)
MB [auth AL]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053136 3000068 SCOP2B (2022-06-29)
QB [auth AP]SCOP2 FamilyRibosomal protein S25-like 8096933 4007308 SCOP2 (2022-06-29)
QB [auth AP]SCOP2 SuperfamilyWinged helix DNA-binding domain 8096934 3000034 SCOP2 (2022-06-29)
TB [auth AS]SCOP2 FamilyCold shock DNA-binding domain-like 8096943 4001909 SCOP2 (2022-06-29)
TB [auth AS]SCOP2 SuperfamilyNucleic acid-binding proteins 8096944 3000135 SCOP2 (2022-06-29)
UB [auth AT]SCOP2 FamilyRibosomal protein S14p/S29e 8096925 4003647 SCOP2 (2022-06-29)
UB [auth AT]SCOP2 SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8096926 3000068 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ARibosomal_L2_1e6xirA2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
ARibosomal_L2_C_2e6xirA1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)
JRibosomal_L5_Ce6xirJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
K [auth L]Ribosomal_L13ee6xirL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)
L [auth M]Ribosomal_L14ee6xirM1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
M [auth N]Ribosomal_L15ee6xirN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
N [auth O]Ribosomal_L13e6xirO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
O [auth P]Ribosomal_L22e6xirP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
P [auth Q]Ribosomal_L18e6xirQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
Q [auth R]Ribosomal_L19e_Ne6xirR1 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: Ribosomal_L19e_NECOD (1.6)
Q [auth R]Ribosomal_L19e_Ce6xirR2 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (1.6)
R [auth S]Ribosomal_L18Ae6xirS1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
S [auth T]Ribosomal_L21ee6xirT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L21eECOD (1.6)
BRibosomal_L3e6xirB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
T [auth U]Ribosomal_L22ee6xirU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: Ribosomal_L22eECOD (1.6)
U [auth V]Ribosomal_L14e6xirV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
V [auth W]Ribosomal_L24ee6xirW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
W [auth X]Ribosomal_L23_3e6xirX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_3ECOD (1.6)
X [auth Y]Ribosomal_L26e6xirY1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
Y [auth Z]Ribosomal_L27ee6xirZ1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L27eECOD (1.6)
Z [auth AA]S10_plectine6xirAA1 A: alpha arraysX: HTHH: HTHT: wingedF: S10_plectinECOD (1.6)
AA [auth AB]Ribosomal_S17_1e6xirAB1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
CRibosomal_L4e6xirC1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
CRibos_L4_asso_Ce6xirC2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
EA [auth a]Ribosomal_L18e6xira1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
FA [auth b]Ribosomal_L29ee6xirb1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: Ribosomal_L29eECOD (1.6)
GA [auth c]Ribosomal_L7Aee6xirc1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
HA [auth d]Ribosomal_L31ee6xird1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
IA [auth e]Ribosomal_L32ee6xire1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
JA [auth f]Ribosomal_L35Aee6xirf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
KA [auth g]Ribosomal_L34ee6xirg1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: Ribosomal_L34eECOD (1.6)
LA [auth h]Ribosomal_L29_2e6xirh1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
MA [auth i]Ribosomal_L36ee6xiri1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: Ribosomal_L36eECOD (1.6)
DRibosomal_L5ee6xirD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
NA [auth j]Ribosomal_L37ee6xirj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
OA [auth k]Ribosomal_L38ee6xirk1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: Ribosomal_L38eECOD (1.6)
PA [auth l]Ribosomal_L39e6xirl1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: Ribosomal_L39ECOD (1.6)
QA [auth n]Ribosomal_L41e6xirn1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: Ribosomal_L41ECOD (1.6)
RA [auth o]Ribosomal_L44e6xiro1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L44ECOD (1.6)
SA [auth p]Ribosomal_L37aee6xirp1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37aeECOD (1.6)
UA [auth q]Ribosomal_S2_2e6xirq1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
VA [auth r]Ribosomal_S3Ae_Ne6xirr1 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: Ribosomal_S3Ae_NECOD (1.6)
VA [auth r]Ribosomal_S3Ae_Ce6xirr2 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
WA [auth s]Ribosomal_S5_C_1e6xirs1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
WA [auth s]Ribosomal_S5_3e6xirs2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
WA [auth s]Ribosomal_S5_2e6xirs3 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
ERibosomal_L6ee6xirE1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)
XA [auth t]Ribosomal_S3_Ce6xirt2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
XA [auth t]KH_2_3e6xirt1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
YA [auth u]Ribosomal_S4ee6xiru2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
YA [auth u]40S_S4_Ce6xiru1 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
YA [auth u]RS4NTe6xiru3 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
ZA [auth v]Ribosomal_S7_1e6xirv1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
AB [auth w]Ribosomal_S6ee6xirw1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)
BB [auth x]Ribosomal_S7e_Ne6xirx1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
BB [auth x]Ribosomal_S7e_C_2e6xirx2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_C_2ECOD (1.6)
CB [auth y]Ribosomal_S8ee6xiry1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)
DB [auth z]S4e6xirz1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
EB [auth AD]Ribosomal_S13_Ne6xirAD1 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
EB [auth AD]Ribosomal_S15_2e6xirAD2 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
FB [auth AE]Ribosomal_S11e6xirAE1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
GB [auth AF]Ribosomal_S19e6xirAF1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
FRibosomal_L30_1e6xirF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
HB [auth AG]Ribosomal_S9e6xirAG1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
IB [auth AH]Ribosomal_S17ee6xirAH1 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
JB [auth AI]Ribosomal_S13e6xirAI1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
KB [auth AJ]Ribosomal_S19ee6xirAJ1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
LB [auth AK]Ribosomal_S10_1e6xirAK1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
MB [auth AL]Ribosomal_S21ee6xirAL1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
NB [auth AM]Ribosomal_S8_N_1e6xirAM1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
NB [auth AM]Ribosomal_S8_C_1e6xirAM2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
OB [auth AN]Ribosom_S12_S23e6xirAN1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
PB [auth AO]Ribosomal_S24ee6xirAO1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
QB [auth AP]Ribosomal_S25e6xirAP1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)
GRibosomal_L7Ae_1e6xirG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
RB [auth AQ]Ribosomal_S26ee6xirAQ1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S26eECOD (1.6)
SB [auth AR]Ribosomal_S27ee6xirAR1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
TB [auth AS]Ribosomal_S28ee6xirAS1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
UB [auth AT]Ribosomal_S14_2e6xirAT1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)
VB [auth AV]ANAPC4_WD40_2e6xirAV1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: ANAPC4_WD40_2ECOD (1.6)
HRibosomal_L6_2e6xirH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
HRibosomal_L6e6xirH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
IRibosomal_L16e6xirI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
K [auth L]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
K [auth L]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
L [auth M]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
L [auth M]PF00467KOW motif (KOW)KOW motif- Family
M [auth N]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
N [auth O]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
N [auth O]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
O [auth P]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
O [auth P]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
P [auth Q]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
P [auth Q]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
Q [auth R]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
R [auth S]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
T [auth U]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
T [auth U]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
T [auth U]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
T [auth U]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
U [auth V]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
U [auth V]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
V [auth W]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
W [auth X]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
W [auth X]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
X [auth Y]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
X [auth Y]PF00467KOW motif (KOW)KOW motif- Family
Y [auth Z]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
Y [auth Z]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
Y [auth Z]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
Z [auth AA]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
AA [auth AB]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
AA [auth AB]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
EB [auth AD]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
FB [auth AE]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
HB [auth AG]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
JB [auth AI]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
KB [auth AJ]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
MB [auth AL]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
OB [auth AN]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
PB [auth AO]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
SB [auth AR]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
VB [auth AV]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
60S ribosomal protein L2-A
RPL11B isoform 1---
K [auth L]60S ribosomal protein L13-A
L [auth M]60S ribosomal protein L14-A
M [auth N]60S ribosomal protein L15-A
N [auth O]60S ribosomal protein L16-A
O [auth P]60S ribosomal protein L17-A
P [auth Q]60S ribosomal protein L18-A
Q [auth R]60S ribosomal protein L19-A
R [auth S]60S ribosomal protein L20-A
S [auth T]60S ribosomal protein L21-A
RPL3 isoform 1---
T [auth U]60S ribosomal protein L22-A
U [auth V]60S ribosomal protein L23-A
V [auth W]RPL24A isoform 1---
W [auth X]60S ribosomal protein L25
X [auth Y]60S ribosomal protein L26-A
Y [auth Z]60S ribosomal protein L27-A
Z [auth AA]40S ribosomal protein S10-A
AA [auth AB]40S ribosomal protein S11-A
BA [auth 1]35S ribosomal RNA---
CA [auth 3]5S ribosomal RNA---
RPL4A isoform 1---
DA [auth 4]5.8S ribosomal RNA---
EA [auth a]60S ribosomal protein L28
FA [auth b]RPL29 isoform 1---
GA [auth c]60S ribosomal protein L30
HA [auth d]60S ribosomal protein L31-A
IA [auth e]RPL32 isoform 1---
JA [auth f]60S ribosomal protein L33-A
KA [auth g]60S ribosomal protein L34-A
LA [auth h]60S ribosomal protein L35-A
MA [auth i]60S ribosomal protein L36-A
RPL5 isoform 1---
NA [auth j]60S ribosomal protein L37-A
OA [auth k]RPL38 isoform 1---
PA [auth l]60S ribosomal protein L39
QA [auth n]RPL41A isoform 1---
RA [auth o]60S ribosomal protein L42-A
SA [auth p]60S ribosomal protein L43-A
TA [auth 2]18S ribosomal RNA---
UA [auth q]40S ribosomal protein S0-A
VA [auth r]RPS1A isoform 1---
WA [auth s]RPS2 isoform 1---
60S ribosomal protein L6-A
XA [auth t]RPS3 isoform 1---
YA [auth u]40S ribosomal protein S4-A
ZA [auth v]Rps5p
AB [auth w]40S ribosomal protein S6-A
BB [auth x]40S ribosomal protein S7-A
CB [auth y]RPS8A isoform 1---
DB [auth z]40S ribosomal protein S9-A
EB [auth AD]40S ribosomal protein S13
FB [auth AE]40S ribosomal protein S14-B
GB [auth AF]RPS15 isoform 1---
60S ribosomal protein L7-A
HB [auth AG]40S ribosomal protein S16-A
IB [auth AH]40S ribosomal protein S17-B
JB [auth AI]40S ribosomal protein S18-A
KB [auth AJ]40S ribosomal protein S19-A
LB [auth AK]RPS20 isoform 1---
MB [auth AL]40S ribosomal protein S21-A
NB [auth AM]RPS22A isoform 1---
OB [auth AN]40S ribosomal protein S23-A
PB [auth AO]40S ribosomal protein S24-A
QB [auth AP]RPS25A isoform 1---
RPL8A isoform 1---
RB [auth AQ]RPS26B isoform 1---
SB [auth AR]40S ribosomal protein S27-A
TB [auth AS]RPS28A isoform 1---
UB [auth AT]RPS29A isoform 1---
VB [auth AV]Guanine nucleotide-binding protein subunit beta-like protein
WB [auth AX],
XB [auth AZ]
Transfer RNA---
RPL9A isoform 1---
RPL10 isoform 1---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
IPR002171Large ribosomal subunit protein uL2Family
K [auth L]IPR001380Large ribosomal subunit protein eL13Family
K [auth L]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
L [auth M]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
L [auth M]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
L [auth M]IPR039660Large ribosomal subunit protein eL14Family
L [auth M]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
L [auth M]IPR002784Large ribosomal subunit protein eL14 domainDomain
L [auth M]IPR005824KOWDomain
M [auth N]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
M [auth N]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
M [auth N]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
M [auth N]IPR000439Large ribosomal subunit protein eL15Family
N [auth O]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
N [auth O]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
N [auth O]IPR005822Large ribosomal subunit protein uL13Family
N [auth O]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
O [auth P]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
O [auth P]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
O [auth P]IPR001063Large ribosomal subunit protein uL22Family
O [auth P]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
P [auth Q]IPR021131Large ribosomal subunit protein uL15/eL18Domain
P [auth Q]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
P [auth Q]IPR000039Large ribosomal subunit protein eL18Family
P [auth Q]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
Q [auth R]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
Q [auth R]IPR039547Large ribosomal subunit protein eL19Family
Q [auth R]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
Q [auth R]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
Q [auth R]IPR000196Large ribosomal subunit protein eL19 domainDomain
Q [auth R]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
R [auth S]IPR028877Large ribosomal subunit protein eL20Family
R [auth S]IPR023573Large ribosomal subunit protein eL20 domainDomain
R [auth S]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
S [auth T]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
S [auth T]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
S [auth T]IPR001147Large ribosomal subunit protein eL21Family
S [auth T]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
T [auth U]IPR002671Large ribosomal subunit protein eL22Family
T [auth U]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
U [auth V]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
U [auth V]IPR000218Large ribosomal subunit protein uL14Family
U [auth V]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
W [auth X]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
W [auth X]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
W [auth X]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
W [auth X]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
W [auth X]IPR013025Large ribosomal subunit protein uL23-likeFamily
X [auth Y]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
X [auth Y]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
X [auth Y]IPR005824KOWDomain
X [auth Y]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
X [auth Y]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
X [auth Y]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
Y [auth Z]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
Y [auth Z]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
Y [auth Z]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Y [auth Z]IPR001141Large ribosomal subunit protein eL27Family
Y [auth Z]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
Z [auth AA]IPR037447Small ribosomal subunit protein eS10Family
Z [auth AA]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
Z [auth AA]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
Z [auth AA]IPR005326Plectin/eS10, N-terminalDomain
AA [auth AB]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
AA [auth AB]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
AA [auth AB]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
AA [auth AB]IPR000266Small ribosomal subunit protein uS17Family
AA [auth AB]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
EA [auth a]IPR021131Large ribosomal subunit protein uL15/eL18Domain
EA [auth a]IPR030878Large ribosomal subunit protein uL15Family
EA [auth a]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
EA [auth a]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
GA [auth c]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
GA [auth c]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
GA [auth c]IPR039109Large ribosomal subunit protein eL30-likeFamily
GA [auth c]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
HA [auth d]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
HA [auth d]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
HA [auth d]IPR000054Large ribosomal subunit protein eL31Family
JA [auth f]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
JA [auth f]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
JA [auth f]IPR001780Large ribosomal subunit protein eL33Family
JA [auth f]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
KA [auth g]IPR008195Large ribosomal subunit protein eL34Family
KA [auth g]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
LA [auth h]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
LA [auth h]IPR001854Large ribosomal subunit protein uL29Family
LA [auth h]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
LA [auth h]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
MA [auth i]IPR000509Large ribosomal subunit protein eL36Family
MA [auth i]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
NA [auth j]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
NA [auth j]IPR001569Large ribosomal subunit protein eL37Family
NA [auth j]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
NA [auth j]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
PA [auth l]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
PA [auth l]IPR000077Large ribosomal subunit protein eL39Family
PA [auth l]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
RA [auth o]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
RA [auth o]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
RA [auth o]IPR000552Large ribosomal subunit protein eL42Family
SA [auth p]IPR002674Large ribosomal subunit protein eL43Family
SA [auth p]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
SA [auth p]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
SA [auth p]IPR050522Eukaryotic ribosomal protein eL43Family
UA [auth q]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
UA [auth q]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
UA [auth q]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
UA [auth q]IPR001865Small ribosomal subunit protein uS2Family
UA [auth q]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR000915Large ribosomal subunit protein eL6Family
YA [auth u]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
YA [auth u]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
YA [auth u]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
YA [auth u]IPR002942RNA-binding S4 domainDomain
YA [auth u]IPR013845Small ribosomal subunit protein eS4, central regionDomain
YA [auth u]IPR000876Small ribosomal subunit protein eS4Family
YA [auth u]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
YA [auth u]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
YA [auth u]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
YA [auth u]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
YA [auth u]IPR005824KOWDomain
ZA [auth v]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
ZA [auth v]IPR000235Small ribosomal subunit protein uS7Family
ZA [auth v]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
ZA [auth v]IPR023798Small ribosomal subunit protein uS7 domainDomain
ZA [auth v]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
AB [auth w]IPR014401Small ribosomal subunit protein eS6-likeFamily
AB [auth w]IPR001377Small ribosomal subunit protein eS6Family
AB [auth w]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
BB [auth x]IPR000554Small ribosomal subunit protein eS7Family
BB [auth x]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
DB [auth z]IPR002942RNA-binding S4 domainDomain
DB [auth z]IPR022801Small ribosomal subunit protein uS4Family
DB [auth z]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
DB [auth z]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
DB [auth z]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
DB [auth z]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
EB [auth AD]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
EB [auth AD]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
EB [auth AD]IPR000589Small ribosomal subunit protein uS15Family
EB [auth AD]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
FB [auth AE]IPR001971Small ribosomal subunit protein uS11Family
FB [auth AE]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
FB [auth AE]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
IPR039699Large ribosomal subunit protein uL30Family
IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
HB [auth AG]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
HB [auth AG]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
HB [auth AG]IPR000754Small ribosomal subunit protein uS9Family
HB [auth AG]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
IB [auth AH]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
IB [auth AH]IPR001210Small ribosomal subunit protein eS17Family
IB [auth AH]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
JB [auth AI]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
JB [auth AI]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
JB [auth AI]IPR001892Small ribosomal subunit protein uS13Family
JB [auth AI]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
KB [auth AJ]IPR001266Small ribosomal subunit protein eS19Family
KB [auth AJ]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
KB [auth AJ]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
KB [auth AJ]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
MB [auth AL]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
MB [auth AL]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
MB [auth AL]IPR001931Small ribosomal subunit protein eS21Family
OB [auth AN]IPR006032Small ribosomal subunit protein uS12Family
OB [auth AN]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
OB [auth AN]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
PB [auth AO]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
PB [auth AO]IPR001976Small ribosomal subunit protein eS24Family
PB [auth AO]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
PB [auth AO]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
SB [auth AR]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
SB [auth AR]IPR000592Small ribosomal subunit protein eS27Family
SB [auth AR]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
VB [auth AV]IPR019775WD40 repeat, conserved siteConserved Site
VB [auth AV]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
VB [auth AV]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
VB [auth AV]IPR045223Small ribosomal subunit protein RACK1-likeFamily
VB [auth AV]IPR001680WD40 repeatRepeat
VB [auth AV]IPR020472G-protein beta WD-40 repeatRepeat