6XBE
Structure of NDM-1 in complex with macrocycle inhibitor NDM1i-1F
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
E [auth C] | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8097724 | 3001057 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8097724 | 3001057 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8097724 | 3001057 | SCOP2B (2022-06-29) |
G [auth D] | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8097724 | 3001057 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E [auth C] | Lactamase_B | e6xbeC1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B | ECOD (1.6) |
A | Lactamase_B | e6xbeA1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B | ECOD (1.6) |
C [auth B] | Lactamase_B | e6xbeB1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B | ECOD (1.6) |
G [auth D] | Lactamase_B | e6xbeD1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth B], E [auth C], G [auth D] | PF00753 | Metallo-beta-lactamase superfamily (Lactamase_B) | Metallo-beta-lactamase superfamily | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, C [auth B], E [auth C], G [auth D] | BlaNDM-4_1_JQ348841 | - | ||
B [auth F], D [auth G], F [auth H], H [auth I] | macrocycle inhibitor NDM1i-1F | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, C [auth B], E [auth C], G [auth D] | IPR036866 | Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | Homologous Superfamily |
A, C [auth B], E [auth C], G [auth D] | IPR001279 | Metallo-beta-lactamase | Domain |
A, C [auth B], E [auth C], G [auth D] | IPR050855 | Metallo-beta-lactamase type 2-like | Family |