6X5K
Crystal structure of CODH/ACS with carbon monoxide bound to the A-cluster
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Prismane protein N-terminal helical bundle-like | 8055590 | 3002294 | SCOP2B (2021-05-27) |
A | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8055589 | 3001926 | SCOP2B (2021-05-27) |
A | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8033918 | 3001926 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8033918 | 3001926 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8055589 | 3001926 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Prismane protein N-terminal helical bundle-like | 8055590 | 3002294 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8055589 | 3001926 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | Prismane protein N-terminal helical bundle-like | 8055590 | 3002294 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8033918 | 3001926 | SCOP2B (2021-05-27) |
D | SCOP2B Superfamily | Prismane protein N-terminal helical bundle-like | 8055590 | 3002294 | SCOP2B (2021-05-27) |
D | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8033918 | 3001926 | SCOP2B (2021-05-27) |
D | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8055589 | 3001926 | SCOP2B (2021-05-27) |
E [auth M] | SCOP2B Superfamily | CdhC C-terminal domain-like | 8055632 | 3002296 | SCOP2B (2021-05-27) |
E [auth M] | SCOP2B Superfamily | Prismane protein N-terminal helical bundle-like | 8055630 | 3002294 | SCOP2B (2021-05-27) |
E [auth M] | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8033920 | 3001926 | SCOP2B (2021-05-27) |
E [auth M] | SCOP2B Superfamily | CdhC linker domain-like | 8055631 | 3002295 | SCOP2B (2021-05-27) |
F [auth N] | SCOP2B Superfamily | CdhC C-terminal domain-like | 8055632 | 3002296 | SCOP2B (2021-05-27) |
F [auth N] | SCOP2B Superfamily | CdhC linker domain-like | 8055631 | 3002295 | SCOP2B (2021-05-27) |
F [auth N] | SCOP2B Superfamily | Prismane protein N-terminal helical bundle-like | 8055630 | 3002294 | SCOP2B (2021-05-27) |
F [auth N] | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8033920 | 3001926 | SCOP2B (2021-05-27) |
G [auth O] | SCOP2B Superfamily | CdhC linker domain-like | 8055631 | 3002295 | SCOP2B (2021-05-27) |
G [auth O] | SCOP2B Superfamily | CdhC C-terminal domain-like | 8055632 | 3002296 | SCOP2B (2021-05-27) |
G [auth O] | SCOP2B Superfamily | Prismane protein N-terminal helical bundle-like | 8055630 | 3002294 | SCOP2B (2021-05-27) |
G [auth O] | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8033920 | 3001926 | SCOP2B (2021-05-27) |
H [auth P] | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8033920 | 3001926 | SCOP2B (2021-05-27) |
H [auth P] | SCOP2B Superfamily | Prismane protein N-terminal helical bundle-like | 8055630 | 3002294 | SCOP2B (2021-05-27) |
H [auth P] | SCOP2B Superfamily | CdhC C-terminal domain-like | 8055632 | 3002296 | SCOP2B (2021-05-27) |
H [auth P] | SCOP2B Superfamily | CdhC linker domain-like | 8055631 | 3002295 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF03063 | e6x5kA2 | A: alpha bundles | X: Helical bundle domain in prismane-like proteins (From Topology) | H: Helical bundle domain in prismane-like proteins (From Topology) | T: Helical bundle domain in prismane-like proteins | F: PF03063 | ECOD (1.6) |
A | PF03063 | e6x5kA1 | A: a/b three-layered sandwiches | X: Rossmann-like domain in prismane-like proteins (From Topology) | H: Rossmann-like domain in prismane-like proteins (From Topology) | T: Rossmann-like domain in prismane-like proteins | F: PF03063 | ECOD (1.6) |
A | F_UNCLASSIFIED | e6x5kA4 | A: few secondary structure elements | X: Fe-binding domain in prismane-like proteins (From Topology) | H: Fe-binding domain in prismane-like proteins (From Topology) | T: Fe-binding domain in prismane-like proteins | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF03063 | e6x5kB4 | A: alpha bundles | X: Helical bundle domain in prismane-like proteins (From Topology) | H: Helical bundle domain in prismane-like proteins (From Topology) | T: Helical bundle domain in prismane-like proteins | F: PF03063 | ECOD (1.6) |
B | PF03063 | e6x5kB1 | A: a/b three-layered sandwiches | X: Rossmann-like domain in prismane-like proteins (From Topology) | H: Rossmann-like domain in prismane-like proteins (From Topology) | T: Rossmann-like domain in prismane-like proteins | F: PF03063 | ECOD (1.6) |
B | F_UNCLASSIFIED | e6x5kB3 | A: few secondary structure elements | X: Fe-binding domain in prismane-like proteins (From Topology) | H: Fe-binding domain in prismane-like proteins (From Topology) | T: Fe-binding domain in prismane-like proteins | F: F_UNCLASSIFIED | ECOD (1.6) |
C | PF03063 | e6x5kC3 | A: alpha bundles | X: Helical bundle domain in prismane-like proteins (From Topology) | H: Helical bundle domain in prismane-like proteins (From Topology) | T: Helical bundle domain in prismane-like proteins | F: PF03063 | ECOD (1.6) |
C | PF03063 | e6x5kC1 | A: a/b three-layered sandwiches | X: Rossmann-like domain in prismane-like proteins (From Topology) | H: Rossmann-like domain in prismane-like proteins (From Topology) | T: Rossmann-like domain in prismane-like proteins | F: PF03063 | ECOD (1.6) |
C | F_UNCLASSIFIED | e6x5kC2 | A: few secondary structure elements | X: Fe-binding domain in prismane-like proteins (From Topology) | H: Fe-binding domain in prismane-like proteins (From Topology) | T: Fe-binding domain in prismane-like proteins | F: F_UNCLASSIFIED | ECOD (1.6) |
D | PF03063 | e6x5kD4 | A: alpha bundles | X: Helical bundle domain in prismane-like proteins (From Topology) | H: Helical bundle domain in prismane-like proteins (From Topology) | T: Helical bundle domain in prismane-like proteins | F: PF03063 | ECOD (1.6) |
D | PF03063 | e6x5kD1 | A: a/b three-layered sandwiches | X: Rossmann-like domain in prismane-like proteins (From Topology) | H: Rossmann-like domain in prismane-like proteins (From Topology) | T: Rossmann-like domain in prismane-like proteins | F: PF03063 | ECOD (1.6) |
D | F_UNCLASSIFIED | e6x5kD3 | A: few secondary structure elements | X: Fe-binding domain in prismane-like proteins (From Topology) | H: Fe-binding domain in prismane-like proteins (From Topology) | T: Fe-binding domain in prismane-like proteins | F: F_UNCLASSIFIED | ECOD (1.6) |
E [auth M] | PF18537 | e6x5kM1 | A: alpha bundles | X: Helical bundle domain in prismane-like proteins (From Topology) | H: Helical bundle domain in prismane-like proteins (From Topology) | T: Helical bundle domain in prismane-like proteins | F: PF18537 | ECOD (1.6) |
E [auth M] | PF03598 | e6x5kM4 | A: a+b complex topology | X: first a+b domain in acetyl-CoA synthase (From Topology) | H: first a+b domain in acetyl-CoA synthase (From Topology) | T: first a+b domain in acetyl-CoA synthase | F: PF03598 | ECOD (1.6) |
E [auth M] | PF19436 | e6x5kM5 | A: a+b complex topology | X: second a+b domain in acetyl-CoA synthase (From Topology) | H: second a+b domain in acetyl-CoA synthase (From Topology) | T: second a+b domain in acetyl-CoA synthase | F: PF19436 | ECOD (1.6) |
E [auth M] | F_UNCLASSIFIED | e6x5kM2 | A: a/b three-layered sandwiches | X: Rossmann-like domain in prismane-like proteins (From Topology) | H: Rossmann-like domain in prismane-like proteins (From Topology) | T: Rossmann-like domain in prismane-like proteins | F: F_UNCLASSIFIED | ECOD (1.6) |
E [auth M] | PF19436 | e6x5kM3 | A: few secondary structure elements | X: Fe-binding domain in prismane-like proteins (From Topology) | H: Fe-binding domain in prismane-like proteins (From Topology) | T: Fe-binding domain in prismane-like proteins | F: PF19436 | ECOD (1.6) |
F [auth N] | PF18537 | e6x5kN1 | A: alpha bundles | X: Helical bundle domain in prismane-like proteins (From Topology) | H: Helical bundle domain in prismane-like proteins (From Topology) | T: Helical bundle domain in prismane-like proteins | F: PF18537 | ECOD (1.6) |
F [auth N] | PF03598 | e6x5kN4 | A: a+b complex topology | X: first a+b domain in acetyl-CoA synthase (From Topology) | H: first a+b domain in acetyl-CoA synthase (From Topology) | T: first a+b domain in acetyl-CoA synthase | F: PF03598 | ECOD (1.6) |
F [auth N] | PF19436 | e6x5kN2 | A: a+b complex topology | X: second a+b domain in acetyl-CoA synthase (From Topology) | H: second a+b domain in acetyl-CoA synthase (From Topology) | T: second a+b domain in acetyl-CoA synthase | F: PF19436 | ECOD (1.6) |
F [auth N] | F_UNCLASSIFIED | e6x5kN3 | A: a/b three-layered sandwiches | X: Rossmann-like domain in prismane-like proteins (From Topology) | H: Rossmann-like domain in prismane-like proteins (From Topology) | T: Rossmann-like domain in prismane-like proteins | F: F_UNCLASSIFIED | ECOD (1.6) |
F [auth N] | PF19436 | e6x5kN5 | A: few secondary structure elements | X: Fe-binding domain in prismane-like proteins (From Topology) | H: Fe-binding domain in prismane-like proteins (From Topology) | T: Fe-binding domain in prismane-like proteins | F: PF19436 | ECOD (1.6) |
G [auth O] | PF18537 | e6x5kO4 | A: alpha bundles | X: Helical bundle domain in prismane-like proteins (From Topology) | H: Helical bundle domain in prismane-like proteins (From Topology) | T: Helical bundle domain in prismane-like proteins | F: PF18537 | ECOD (1.6) |
G [auth O] | PF03598 | e6x5kO5 | A: a+b complex topology | X: first a+b domain in acetyl-CoA synthase (From Topology) | H: first a+b domain in acetyl-CoA synthase (From Topology) | T: first a+b domain in acetyl-CoA synthase | F: PF03598 | ECOD (1.6) |
G [auth O] | PF19436 | e6x5kO1 | A: a+b complex topology | X: second a+b domain in acetyl-CoA synthase (From Topology) | H: second a+b domain in acetyl-CoA synthase (From Topology) | T: second a+b domain in acetyl-CoA synthase | F: PF19436 | ECOD (1.6) |
G [auth O] | F_UNCLASSIFIED | e6x5kO2 | A: a/b three-layered sandwiches | X: Rossmann-like domain in prismane-like proteins (From Topology) | H: Rossmann-like domain in prismane-like proteins (From Topology) | T: Rossmann-like domain in prismane-like proteins | F: F_UNCLASSIFIED | ECOD (1.6) |
G [auth O] | PF19436 | e6x5kO3 | A: few secondary structure elements | X: Fe-binding domain in prismane-like proteins (From Topology) | H: Fe-binding domain in prismane-like proteins (From Topology) | T: Fe-binding domain in prismane-like proteins | F: PF19436 | ECOD (1.6) |
H [auth P] | PF18537 | e6x5kP5 | A: alpha bundles | X: Helical bundle domain in prismane-like proteins (From Topology) | H: Helical bundle domain in prismane-like proteins (From Topology) | T: Helical bundle domain in prismane-like proteins | F: PF18537 | ECOD (1.6) |
H [auth P] | PF03598 | e6x5kP1 | A: a+b complex topology | X: first a+b domain in acetyl-CoA synthase (From Topology) | H: first a+b domain in acetyl-CoA synthase (From Topology) | T: first a+b domain in acetyl-CoA synthase | F: PF03598 | ECOD (1.6) |
H [auth P] | PF19436 | e6x5kP2 | A: a+b complex topology | X: second a+b domain in acetyl-CoA synthase (From Topology) | H: second a+b domain in acetyl-CoA synthase (From Topology) | T: second a+b domain in acetyl-CoA synthase | F: PF19436 | ECOD (1.6) |
H [auth P] | F_UNCLASSIFIED | e6x5kP4 | A: a/b three-layered sandwiches | X: Rossmann-like domain in prismane-like proteins (From Topology) | H: Rossmann-like domain in prismane-like proteins (From Topology) | T: Rossmann-like domain in prismane-like proteins | F: F_UNCLASSIFIED | ECOD (1.6) |
H [auth P] | PF19436 | e6x5kP3 | A: few secondary structure elements | X: Fe-binding domain in prismane-like proteins (From Topology) | H: Fe-binding domain in prismane-like proteins (From Topology) | T: Fe-binding domain in prismane-like proteins | F: PF19436 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03063 | Prismane/CO dehydrogenase family (Prismane) | Prismane/CO dehydrogenase family | - | Family | |
E [auth M], F [auth N], G [auth O], H [auth P] | PF03598 | CO dehydrogenase/acetyl-CoA synthase complex beta subunit (CdhC) | CO dehydrogenase/acetyl-CoA synthase complex beta subunit | - | Domain |
E [auth M], F [auth N], G [auth O], H [auth P] | PF19436 | ACS/CODH beta subunit C-terminal (ACS_CODH_B_C) | ACS/CODH beta subunit C-terminal | Acetyl-CoA synthase/CO dehydrogenase (ACS/CODH) is a bifunctional enzyme that catalyses the reversible reduction of CO2 to CO (CODH activity, the beta subunit) and the synthesis or degradation of acetyl-CoA (catalysed by ACS, the alpha subunit). CODH ... | Domain |
E [auth M], F [auth N], G [auth O], H [auth P] | PF18537 | Carbon monoxide dehydrogenase subunit alpha N-terminal domain (CODH_A_N) | Carbon monoxide dehydrogenase subunit alpha N-terminal domain | Acetyl-coenzyme A (CoA) synthase/carbon monoxide dehydrogenase (ACS/CODH) is a bifunctional enzyme that catalyzes the reversible reduction of CO2 to CO (CODH activity). This entry is for the N-terminal domain found in ACS/CODH subunit alpha [1]. | Domain |