6WJ8
Crystal structure of gamma-aminobutyrate aminotransferase PuuE from Klebsiella pneumoniae in complex with PLP
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6wj8a_ | Alpha and beta proteins (a/b) | PLP-dependent transferase-like | PLP-dependent transferases | automated matches | automated matches | SA1 (Klebsiella pneumoniae subsp. pneumoniae SA1 ) [TaxId: 1379688 ], | SCOPe (2.08) |
B | d6wj8b_ | Alpha and beta proteins (a/b) | PLP-dependent transferase-like | PLP-dependent transferases | automated matches | automated matches | SA1 (Klebsiella pneumoniae subsp. pneumoniae SA1 ) [TaxId: 1379688 ], | SCOPe (2.08) |
C | d6wj8c_ | Alpha and beta proteins (a/b) | PLP-dependent transferase-like | PLP-dependent transferases | automated matches | automated matches | SA1 (Klebsiella pneumoniae subsp. pneumoniae SA1 ) [TaxId: 1379688 ], | SCOPe (2.08) |
D | d6wj8d_ | Alpha and beta proteins (a/b) | PLP-dependent transferase-like | PLP-dependent transferases | automated matches | automated matches | SA1 (Klebsiella pneumoniae subsp. pneumoniae SA1 ) [TaxId: 1379688 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | GABA-aminotransferase-like | 8096227 | 4000675 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | PLP-dependent transferases | 8096228 | 3000954 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | PLP-dependent transferases | 8096228 | 3000954 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | PLP-dependent transferases | 8096228 | 3000954 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | PLP-dependent transferases | 8096228 | 3000954 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Aminotran_3_C | e6wj8A1 | A: a+b two layers | X: C-terminal domain in some PLP-dependent transferases (From Topology) | H: C-terminal domain in some PLP-dependent transferases (From Topology) | T: C-terminal domain in some PLP-dependent transferases | F: Aminotran_3_C | ECOD (1.6) |
A | Aminotran_3_N | e6wj8A2 | A: a/b three-layered sandwiches | X: PLP-dependent transferases (From Topology) | H: PLP-dependent transferases (From Topology) | T: PLP-dependent transferases | F: Aminotran_3_N | ECOD (1.6) |
B | Aminotran_3_C | e6wj8B2 | A: a+b two layers | X: C-terminal domain in some PLP-dependent transferases (From Topology) | H: C-terminal domain in some PLP-dependent transferases (From Topology) | T: C-terminal domain in some PLP-dependent transferases | F: Aminotran_3_C | ECOD (1.6) |
B | Aminotran_3_N | e6wj8B1 | A: a/b three-layered sandwiches | X: PLP-dependent transferases (From Topology) | H: PLP-dependent transferases (From Topology) | T: PLP-dependent transferases | F: Aminotran_3_N | ECOD (1.6) |
C | Aminotran_3_C | e6wj8C1 | A: a+b two layers | X: C-terminal domain in some PLP-dependent transferases (From Topology) | H: C-terminal domain in some PLP-dependent transferases (From Topology) | T: C-terminal domain in some PLP-dependent transferases | F: Aminotran_3_C | ECOD (1.6) |
C | Aminotran_3_N | e6wj8C2 | A: a/b three-layered sandwiches | X: PLP-dependent transferases (From Topology) | H: PLP-dependent transferases (From Topology) | T: PLP-dependent transferases | F: Aminotran_3_N | ECOD (1.6) |
D | Aminotran_3_C | e6wj8D2 | A: a+b two layers | X: C-terminal domain in some PLP-dependent transferases (From Topology) | H: C-terminal domain in some PLP-dependent transferases (From Topology) | T: C-terminal domain in some PLP-dependent transferases | F: Aminotran_3_C | ECOD (1.6) |
D | Aminotran_3_N | e6wj8D1 | A: a/b three-layered sandwiches | X: PLP-dependent transferases (From Topology) | H: PLP-dependent transferases (From Topology) | T: PLP-dependent transferases | F: Aminotran_3_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C | 3.90.1150.10 | Alpha Beta | Alpha-Beta Complex | Aspartate Aminotransferase, domain 1 | Aspartate Aminotransferase, domain 1 | CATH (utative) |
C | 3.40.640.10 | Alpha Beta | 3-Layer(aba) Sandwich | Aspartate Aminotransferase | domain 2 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR049704 | Aminotransferases class-III pyridoxal-phosphate attachment site | Conserved Site | |
IPR050103 | Class-III Pyridoxal-phosphate-dependent Aminotransferase | Family | |
IPR015424 | Pyridoxal phosphate-dependent transferase | Homologous Superfamily | |
IPR005814 | Aminotransferase class-III | Family | |
IPR015421 | Pyridoxal phosphate-dependent transferase, major domain | Homologous Superfamily | |
IPR015422 | Pyridoxal phosphate-dependent transferase, small domain | Homologous Superfamily | |
IPR004632 | 4-aminobutyrate aminotransferase, bacterial | Family |