Porcine circovirus 2 Rep domain complexed with a single-stranded DNA 10-mer comprising the cleavage site
External Resource: Annotation
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
D [auth G] | PF02407 | e6wdzG1 | A: a+b two layers | X: Alpha-beta plaits | H: Origin of replication-binding domains | T: Origin of replication-binding domains | F: PF02407 | ECOD (1.6) |
B [auth D] | PF02407 | e6wdzD1 | A: a+b two layers | X: Alpha-beta plaits | H: Origin of replication-binding domains | T: Origin of replication-binding domains | F: PF02407 | ECOD (1.6) |
G [auth A] | PF02407 | e6wdzA1 | A: a+b two layers | X: Alpha-beta plaits | H: Origin of replication-binding domains | T: Origin of replication-binding domains | F: PF02407 | ECOD (1.6) |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
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A [auth C], C [auth I], E [auth F], F [auth J] | DNA (5'-D(*TP*AP*GP*TP*AP*TP*TP*AP*CP*C)-3') | - | - | - |
B [auth D], D [auth G], G [auth A] | ATP-dependent helicase Rep | - binding
- adenyl ribonucleotide binding
- nucleotide binding
- purine ribonucleotide binding
- purine ribonucleoside triphosphate binding
- nucleoside phosphate binding
- ion binding
- purine nucleotide binding
- organic cyclic compound binding
- anion binding
- adenyl nucleotide binding
- ATP binding
- heterocyclic compound binding
- carbohydrate derivative binding
- ribonucleotide binding
- small molecule binding
- DNA binding
- nucleic acid binding
- endonuclease activity
- catalytic activity, acting on a nucleic acid
- endodeoxyribonuclease activity, producing 5'-phosphomonoesters
- hydrolase activity
- DNA nuclease activity
- DNA endonuclease activity
- nuclease activity
- hydrolase activity, acting on ester bonds
- catalytic activity, acting on DNA
- endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
- catalytic activity
- pyrophosphatase activity
- ATP hydrolysis activity
- ribonucleoside triphosphate phosphatase activity
- hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
- hydrolase activity, acting on acid anhydrides
- ATP-dependent activity
- catalytic activity, acting on RNA
- helicase activity
- RNA helicase activity
- ATP-dependent activity, acting on RNA
- transferase activity
- nucleotidyltransferase activity
- transferase activity, transferring phosphorus-containing groups
- RNA binding
- cation binding
- metal ion binding
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