6W6V
Structure of yeast RNase MRP holoenzyme
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
D [auth E] | SCOP2B Superfamily | Rnp2-like | 8065989 | 3000630 | SCOP2B (2022-06-29) |
F [auth G] | SCOP2B Superfamily | AlbA-like | 8091019 | 3000507 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D [auth E] | RNase_P_Rpp14 | e6w6vE1 | A: a+b two layers | X: Alpha-beta plaits | H: Rpp14/Pop5-like (From Topology) | T: Rpp14/Pop5-like | F: RNase_P_Rpp14 | ECOD (1.6) |
E [auth F] | Alba | e6w6vF1 | A: a+b two layers | X: IF3-like | H: AlbA-like (From Topology) | T: AlbA-like | F: Alba | ECOD (1.6) |
F [auth G] | Rpp20 | e6w6vG1 | A: a+b two layers | X: IF3-like | H: AlbA-like (From Topology) | T: AlbA-like | F: Rpp20 | ECOD (1.6) |
G [auth H] | UNK_F_TYPE | e6w6vH1 | A: a+b two layers | X: Alpha-beta plaits | H: Rpp14/Pop5-like (From Topology) | T: Rpp14/Pop5-like | F: UNK_F_TYPE | ECOD (1.6) |
H [auth I] | UNK_F_TYPE | e6w6vI1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: UNK_F_TYPE | ECOD (1.6) |
J [auth K] | Rpr2 | e6w6vK1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Rpr2 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
K [auth L] | PF20945 | Ribonuclease MRP protein subunit RMP1 (RMP1) | Ribonuclease MRP protein subunit RMP1 | - | Family |
PF08170 | POPLD (NUC188) domain (POPLD) | POPLD (NUC188) domain | This domain is found in POP1-like nucleolar proteins [1]. | Domain | |
C [auth D] | PF01868 | Ribonuclease P/MRP, subunit p29 (RNase_P-MRP_p29) | Ribonuclease P/MRP, subunit p29 | - | Family |
D [auth E] | PF01900 | Rpp14/Pop5 family (RNase_P_Rpp14) | Rpp14/Pop5 family | - | Family |
E [auth F] | PF01918 | Alba (Alba) | Alba | - | Family |
F [auth G] | PF12328 | Rpp20 subunit of nuclear RNase MRP and P (Rpp20) | Rpp20 subunit of nuclear RNase MRP and P | - | Family |
G [auth H] | PF20976 | Ribonucleases P/MRP protein subunit Pop8 (Pop8) | Ribonucleases P/MRP protein subunit Pop8 | Pop8 is a component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. It is also a component of Ribonuclease MRP, which cleaves pre-rRNA sequences [1]. Ribonuclease P consists of an RNA moiety and at ... | Domain |
H [auth I], I [auth J] | PF01876 | RNase P subunit p30 (RNase_P_p30) | RNase P subunit p30 | This protein is part of the RNase P complex that is involved in tRNA maturation [1]. | Domain |
J [auth K] | PF04032 | RNAse P Rpr2/Rpp21/SNM1 subunit domain (Rpr2) | RNAse P Rpr2/Rpp21/SNM1 subunit domain | - | Family |