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 6VTU | pdb_00006vtu

DH717.1 Fab monomer in complex with man9 glycan

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
B [auth L]d6vtul2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
B [auth L]d6vtul1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
A [auth H]d6vtuh1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
A [auth H]d6vtuh2 Artifacts Tags Tags Tags N-terminal Tags Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth L]LRR_1,LRR_8e6vtuL1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: LRR_1,LRR_8ECOD (v295.2)
A [auth H]LRR_1,LRR_8e6vtuH1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: LRR_1,LRR_8ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B [auth L]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
A [auth H]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
B [auth L]Fab DH717.1 L-LAMBDA Macaca mulatta (Rhesus monkey) IGLV2-23*01, IGLJ3*01, IGLJ2*01, IGLC3*01 V-DOMAIN V-LAMBDA, C-DOMAIN C-LAMBDA IG FAB-GAMMA-1_LAMBDA IMGT (202642-0)
A [auth H]Fab DH717.1 VH-CH1 Macaca mulatta (Rhesus monkey) IGHV4-70*01, IGHJ5-2*01, IGHG1*01, IGHG1*03 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-1_LAMBDA IMGT (202642-0)

SAbDab2 Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B [auth L]Light ChainIGLV2 LambdaGLYCEROL | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranoseSAbDab (2026-10-30)
A [auth H]Heavy ChainIGHV4 -GLYCEROL | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranoseSAbDab (2026-10-30)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth L]DH717.1 light chain- -
A [auth H]DH717.1 heavy chain- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth L]IPR003597Immunoglobulin C1-setDomain
B [auth L]IPR050150Immunoglobulin Variable Light ChainFamily
B [auth L]IPR013783Immunoglobulin-like foldHomologous Superfamily
B [auth L]IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
B [auth L]IPR013106Immunoglobulin V-set domainDomain
B [auth L]IPR003599Immunoglobulin domain subtypeDomain
B [auth L]IPR007110Immunoglobulin-like domainDomain
B [auth L]IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
A [auth H]IPR003597Immunoglobulin C1-setDomain
A [auth H]IPR013783Immunoglobulin-like foldHomologous Superfamily
A [auth H]IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
A [auth H]IPR013106Immunoglobulin V-set domainDomain
A [auth H]IPR003599Immunoglobulin domain subtypeDomain
A [auth H]IPR007110Immunoglobulin-like domainDomain
A [auth H]IPR050380Immune Recognition and Response ModulatorsFamily
A [auth H]IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site