6VOA

Cryo-EM structure of the BBSome-ARL6 complex

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth E]TPR_15e6voaE1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: TPR_15ECOD (1.6)
H [auth A]Rase6voaA1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: RasECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
H [auth A]3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF14781Ciliary BBSome complex subunit 2, N-terminal (BBS2_N)Ciliary BBSome complex subunit 2, N-terminal- Repeat
PF14782Ciliary BBSome complex subunit 2, C-terminal (BBS2_C)Ciliary BBSome complex subunit 2, C-terminal- Family
PF14783Ciliary BBSome complex subunit 2, middle region (BBS2_Mid)Ciliary BBSome complex subunit 2, middle region- Repeat
C [auth E]PF14559Tetratricopeptide repeat (TPR_19)Tetratricopeptide repeat- Repeat
C [auth E]PF13181Tetratricopeptide repeat (TPR_8)Tetratricopeptide repeat- Repeat
C [auth E]PF13414TPR repeat (TPR_11)TPR repeat- Repeat
D [auth G]PF07289Bardet-Biedl syndrome 5 protein (BBL5)Bardet-Biedl syndrome 5 protein- Family
PF13181Tetratricopeptide repeat (TPR_8)Tetratricopeptide repeat- Repeat
PF13424Tetratricopeptide repeat (TPR_12)Tetratricopeptide repeat- Repeat
G [auth I]PF14728PTHB1 C-terminus (PHTB1_C)PTHB1 C-terminus- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth H]Bardet-Biedl syndrome 18 protein-
Bardet-Biedl syndrome 2 protein homolog-
C [auth E]Bardet-Biedl syndrome 4 protein homolog
D [auth G]Bardet-Biedl syndrome 5 protein homolog
E [auth C]Bardet-Biedl syndrome 7 protein homolog-
Tetratricopeptide repeat domain 8
G [auth I]Bardet-Biedl syndrome 9-
H [auth A]ADP-ribosylation factor-like protein 6
I [auth D]BBS1 domain-containing protein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth H]IPR028233Cilia BBSome complex subunit 10Family
IPR029429Ciliary BBSome complex subunit 2, middle regionDomain
IPR016616Bardet-Biedl syndrome 2 proteinFamily
IPR029430Ciliary BBSome complex subunit 2, N-terminalDomain
IPR029333Ciliary BBSome complex subunit 2, C-terminal domainDomain
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
C [auth E]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
C [auth E]IPR019734Tetratricopeptide repeatRepeat
D [auth G]IPR014003BBSome complex member BBS5, PH domainDomain
D [auth G]IPR006606BBSome complex member BBS5Family
D [auth G]IPR030804BBSome complex member BBS5/sex-determination protein fem-3Family
D [auth G]IPR011993PH-like domain superfamilyHomologous Superfamily
E [auth C]IPR016575Bardet-Biedl syndrome 7 proteinFamily
E [auth C]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
E [auth C]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
IPR019734Tetratricopeptide repeatRepeat
IPR028796Tetratricopeptide repeat protein 8Family
G [auth I]IPR026511Parathyroid hormone-responsive B1Family
G [auth I]IPR028074PTHB1, C-terminal domainDomain
G [auth I]IPR028073PTHB1, N-terminal domainDomain
H [auth A]IPR041839ADP-ribosylation factor-like protein 6Family
H [auth A]IPR005225Small GTP-binding domainDomain
H [auth A]IPR024156Small GTPase superfamily, ARF typeFamily
H [auth A]IPR006689Small GTPase superfamily, ARF/SAR typeFamily
H [auth A]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
I [auth D]IPR011047Quinoprotein alcohol dehydrogenase-like superfamilyHomologous Superfamily
I [auth D]IPR028784BBSome complex member BBS1Family
I [auth D]IPR032728Bardet-Biedl syndrome 1, N-terminalDomain

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

ChainsResource LinkGroupSubgroupProtein
mpstrucMONOTOPIC MEMBRANE PROTEINSMembrane Trafficking ProteinsBBSome (complex of 7 Bardet–Biedl syndrome, BBS, proteins), apo form