Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
FSecretin_Ne6ve4F2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
FSecretine6ve4F1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
GSecretin_Ne6ve4G2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
GSecretine6ve4G1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
HSecretin_Ne6ve4H2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
HSecretine6ve4H1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
ISecretin_Ne6ve4I2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
ISecretine6ve4I1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
JSecretin_Ne6ve4J2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
JSecretine6ve4J1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
LSecretin_Ne6ve4L2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
LSecretine6ve4L1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
OSecretin_Ne6ve4O2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
OSecretine6ve4O1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
ASecretin_Ne6ve4A2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
ASecretine6ve4A1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
BSecretin_Ne6ve4B2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
BSecretine6ve4B1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
CSecretin_Ne6ve4C2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
CSecretine6ve4C1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
DSecretin_Ne6ve4D2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
DSecretine6ve4D1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
ESecretin_Ne6ve4E2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
ESecretine6ve4E1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
KSecretin_Ne6ve4K2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
KSecretine6ve4K1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
MSecretin_Ne6ve4M2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
MSecretine6ve4M1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
NSecretin_Ne6ve4N2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
NSecretine6ve4N1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF03958Bacterial type II/III secretion system short domain (Secretin_N)Bacterial type II/III secretion system short domainThis is a short, often repeated, domain found in bacterial type II/III secretory system proteins. All previous NolW-like domains fall into this family.Domain
A, B, C, D, E
PF00263Bacterial type II and III secretion system protein (Secretin)Bacterial type II and III secretion system protein- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR005644NolW-likeDomain
A, B, C, D, E
IPR004846Type II/III secretion system, secretin-like domainDomain
A, B, C, D, E
IPR038591NolW-like superfamilyHomologous Superfamily
A, B, C, D, E
IPR011662Secretin/TonB, short N-terminal domainDomain
A, B, C, D, E
IPR001775GspD/PilQ familyFamily
A, B, C, D, E
IPR004845Type II secretion system protein GspD, conserved siteConserved Site
A, B, C, D, E
IPR021731AMIN domainDomain
A, B, C, D, E
IPR051808Type IV pilus biogenesis and competence proteinFamily
A, B, C, D, E
IPR013355Type IV pilus secretin PilQFamily

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
A, B, C, D, E
OPMTransmembraneBeta-barrel transmembraneOuter bacterial membrane secretinOuter bacterial membrane secretion

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: mpstruc mpstruc Database Homepage