Annotations: 6VE1

Crystal structure of endo-beta-N-acetylglucosaminidase H at high pH

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d6ve1d1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	(Trans)glycosidases	Type II chitinase	automated matches	(Streptomyces plicatus ) [TaxId: 1922 ],	SCOPe (2.08)
D	d6ve1d2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Streptomyces plicatus ) [TaxId: 1922 ],	SCOPe (2.08)
C	d6ve1c1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	(Trans)glycosidases	Type II chitinase	automated matches	(Streptomyces plicatus ) [TaxId: 1922 ],	SCOPe (2.08)
C	d6ve1c2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Streptomyces plicatus ) [TaxId: 1922 ],	SCOPe (2.08)
B	d6ve1b1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	(Trans)glycosidases	Type II chitinase	automated matches	(Streptomyces plicatus ) [TaxId: 1922 ],	SCOPe (2.08)
B	d6ve1b2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Streptomyces plicatus ) [TaxId: 1922 ],	SCOPe (2.08)
A	d6ve1a_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	(Trans)glycosidases	Type II chitinase	automated matches	(Streptomyces plicatus ) [TaxId: 1922 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	(Trans)glycosidases	8043482	3000313	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	(Trans)glycosidases	8043482	3000313	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	(Trans)glycosidases	8043482	3000313	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	(Trans)glycosidases	8043482	3000313	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	LRR_1,LRR_8	e6ve1D1	A: beta barrels	X: cradle loop barrel	H: N-terminal domain of poxin	T: N-terminal domain of poxin	F: LRR_1,LRR_8	ECOD (v294.2)
C	LRR_1,LRR_8	e6ve1C1	A: beta barrels	X: cradle loop barrel	H: N-terminal domain of poxin	T: N-terminal domain of poxin	F: LRR_1,LRR_8	ECOD (v294.2)
B	LRR_1,LRR_8	e6ve1B1	A: beta barrels	X: cradle loop barrel	H: N-terminal domain of poxin	T: N-terminal domain of poxin	F: LRR_1,LRR_8	ECOD (v294.2)
A	LRR_1,LRR_8	e6ve1A1	A: beta barrels	X: cradle loop barrel	H: N-terminal domain of poxin	T: N-terminal domain of poxin	F: LRR_1,LRR_8	ECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Endo-beta-N-acetylglucosaminidase H	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity hydrolase activity, acting on glycosyl bonds hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity	carbohydrate metabolic process primary metabolic process metabolic process cellular process	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR017853	Glycoside hydrolase superfamily	Homologous Superfamily
A, B, C, D	IPR001579	Glycosyl hydrolase family 18, active site	Active Site
A, B, C, D	IPR054861	Endo-beta-N-acetylglucosaminidase H	Family
A, B, C, D	IPR016289	Endo-beta-N-acetylglucosaminidase	Family
A, B, C, D	IPR001223	Glycoside hydrolase family 18, catalytic domain	Domain

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.