6V65
Crystal structure of KRAS(GMPPNP)-NF1(GRD)-SPRED1 complex
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6v65a_ | All beta proteins | PH domain-like barrel | PH domain-like | Enabled/VASP homology 1 domain (EVH1 domain) | Sprouty-related, EVH1 domain-containing protein 1, Spred-1 | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d6v65b_ | All alpha proteins | GTPase activation domain, GAP | GTPase activation domain, GAP | p120GAP domain-like | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C | d6v65c_ | Alpha and beta proteins (a/b) | P-loop containing nucleoside triphosphate hydrolases | P-loop containing nucleoside triphosphate hydrolases | G proteins | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | PH domain-like | 8081750 | 3000134 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | GTPase activation domain, GAP | 8057919 | 3001163 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Ras-like P-loop GTPases | 8060856 | 3002022 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | WH1 | e6v65A1 | A: beta barrels | X: PH domain-like | H: PH domain-like (From Topology) | T: PH domain-like | F: WH1 | ECOD (1.6) |
B | RasGAP | e6v65B1 | A: alpha bundles | X: GTPase activation domain, GAP (From Topology) | H: GTPase activation domain, GAP (From Topology) | T: GTPase activation domain, GAP | F: RasGAP | ECOD (1.6) |
C | Ras | e6v65C1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Ras | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.30.29.30 | Mainly Beta | Roll | PH-domain like | Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | CATH (utative) |
C | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00568 | WH1 domain (WH1) | WH1 domain | WASp Homology domain 1 (WH1) domain. WASP is the protein that is defective in Wiskott-Aldrich syndrome (WAS). The majority of point mutations occur within the amino- terminal WH1 domain. The metabotropic glutamate receptors mGluR1alpha and mGluR5 bi ... | Domain | |
PF00616 | GTPase-activator protein for Ras-like GTPase (RasGAP) | GTPase-activator protein for Ras-like GTPase | - | Family | |
PF00071 | Ras family (Ras) | Ras family | Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motil ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR007875 | Sprouty | Family | |
IPR000697 | WH1/EVH1 domain | Domain | |
IPR011993 | PH-like domain superfamily | Homologous Superfamily | |
IPR041937 | SPRE, EVH1 domain | Domain | |
IPR023337 | c-Kit-binding domain | Domain | |
IPR001251 | CRAL-TRIO lipid binding domain | Domain | |
IPR016024 | Armadillo-type fold | Homologous Superfamily | |
IPR039360 | Ras GTPase-activating protein | Family | |
IPR036865 | CRAL-TRIO lipid binding domain superfamily | Homologous Superfamily | |
IPR008936 | Rho GTPase activation protein | Homologous Superfamily | |
IPR023152 | Ras GTPase-activating protein, conserved site | Conserved Site | |
IPR011993 | PH-like domain superfamily | Homologous Superfamily | |
IPR001936 | Ras GTPase-activating domain | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR005225 | Small GTP-binding domain | Domain | |
IPR020849 | Small GTPase, Ras-type | Family | |
IPR001806 | Small GTPase | Family |