6V4U
Cryo-EM structure of SMCR8-C9orf72-WDR41 complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth C] | ANAPC4_WD40_2 | e6v4uC1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: ANAPC4_WD40_2 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth C] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
B [auth A] | PF15019 | C9orf72-like protein family (C9orf72-like) | C9orf72-like protein family | - | Family |
C [auth B] | PF11704 | Vesicle coat protein involved in Golgi to plasma membrane transport (Folliculin) | Vesicle coat protein involved in Golgi to plasma membrane transport | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth C] | IPR019775 | WD40 repeat, conserved site | Conserved Site |
A [auth C] | IPR036322 | WD40-repeat-containing domain superfamily | Homologous Superfamily |
A [auth C] | IPR040102 | WD repeat-containing protein 41 | Family |
A [auth C] | IPR001680 | WD40 repeat | Repeat |
A [auth C] | IPR020472 | G-protein beta WD-40 repeat | Repeat |
A [auth C] | IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily |
B [auth A] | IPR027819 | Guanine nucleotide exchange factor C9orf72 | Family |
C [auth B] | IPR037520 | Folliculin/SMCR8, longin domain | Domain |
C [auth B] | IPR037521 | Folliculin/SMCR8, tripartite DENN domain | Domain |