6V09
Crystal structure of human recombinant Beta-2 glycoprotein I short tag (ST-B2GPI)
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6v09a1 | Small proteins | Complement control module/SCR domain | Complement control module/SCR domain | Complement control module/SCR domain | beta2-glycoprotein I | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d6v09a6 | Artifacts | Tags | Tags | Tags | N-terminal Tags | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8038852 | 3000902 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8038858 | 3000902 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8038854 | 3000902 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8038859 | 3000902 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8038856 | 3000902 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00084 | e6v09A5 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: PF00084 | ECOD (1.6) |
A | PF09014 | e6v09A1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: PF09014 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.10.70.10 | Mainly Beta | Ribbon | Complement Module | domain 1 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09014 | Beta-2-glycoprotein-1 fifth domain (Sushi_2) | Beta-2-glycoprotein-1 fifth domain | The fifth domain of beta-2-glycoprotein-1 (b2GP-1) is composed of four well-defined anti-parallel beta-strands and two short alpha-helices, as well as a long highly flexible loop. It plays an important role in the binding of b2GP-1 to negatively char ... | Domain | |
PF00084 | Sushi repeat (SCR repeat) (Sushi) | Sushi repeat (SCR repeat) | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000436 | Sushi/SCR/CCP domain | Domain | |
IPR035976 | Sushi/SCR/CCP superfamily | Homologous Superfamily | |
IPR050350 | Complement & Cell Adhesion Regulators | Family | |
IPR015104 | Beta-2-glycoprotein-1 fifth domain | Domain |