6UTH
Allosteric coupling between alpha-rings of 20S proteasome, 20S proteasome singly capped with a PA26/E102A_PANc, together with LFP incubation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034248 | 3000131 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034248 | 3000131 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034248 | 3000131 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034248 | 3000131 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034248 | 3000131 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034248 | 3000131 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034248 | 3000131 | SCOP2B (2022-06-29) |
H [auth Z] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034254 | 3000131 | SCOP2B (2022-06-29) |
I [auth M] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034254 | 3000131 | SCOP2B (2022-06-29) |
J [auth 1] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034254 | 3000131 | SCOP2B (2022-06-29) |
K [auth N] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034254 | 3000131 | SCOP2B (2022-06-29) |
L [auth 2] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034254 | 3000131 | SCOP2B (2022-06-29) |
M [auth H] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034254 | 3000131 | SCOP2B (2022-06-29) |
N [auth V] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034254 | 3000131 | SCOP2B (2022-06-29) |
O [auth I] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034254 | 3000131 | SCOP2B (2022-06-29) |
P [auth W] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034254 | 3000131 | SCOP2B (2022-06-29) |
Q [auth J] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034254 | 3000131 | SCOP2B (2022-06-29) |
R [auth X] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034254 | 3000131 | SCOP2B (2022-06-29) |
S [auth K] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034254 | 3000131 | SCOP2B (2022-06-29) |
T [auth Y] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034254 | 3000131 | SCOP2B (2022-06-29) |
U [auth L] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034254 | 3000131 | SCOP2B (2022-06-29) |
AA [auth T] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034248 | 3000131 | SCOP2B (2022-06-29) |
BA [auth U] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034248 | 3000131 | SCOP2B (2022-06-29) |
V [auth O] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034248 | 3000131 | SCOP2B (2022-06-29) |
W [auth P] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034248 | 3000131 | SCOP2B (2022-06-29) |
X [auth Q] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034248 | 3000131 | SCOP2B (2022-06-29) |
Y [auth R] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034248 | 3000131 | SCOP2B (2022-06-29) |
Z [auth S] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034248 | 3000131 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00227,PF10584 | e6uthA1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
B | PF00227,PF10584 | e6uthB1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
C | PF00227,PF10584 | e6uthC1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
D | PF00227,PF10584 | e6uthD1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
E | PF00227,PF10584 | e6uthE1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
F | PF00227,PF10584 | e6uthF1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
G | PF00227,PF10584 | e6uthG1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
H [auth Z] | PF00227 | e6uthZ1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
I [auth M] | PF00227 | e6uthM1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
J [auth 1] | PF00227 | e6uth11 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
K [auth N] | PF00227 | e6uthN1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
L [auth 2] | PF00227 | e6uth21 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
M [auth H] | PF00227 | e6uthH1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
N [auth V] | PF00227 | e6uthV1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
O [auth I] | PF00227 | e6uthI1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
P [auth W] | PF00227 | e6uthW1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
Q [auth J] | PF00227 | e6uthJ1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
R [auth X] | PF00227 | e6uthX1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
S [auth K] | PF00227 | e6uthK1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
T [auth Y] | PF00227 | e6uthY1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
U [auth L] | PF00227 | e6uthL1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
AA [auth T] | PF00227,PF10584 | e6uthT1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
BA [auth U] | PF00227,PF10584 | e6uthU1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
V [auth O] | PF00227,PF10584 | e6uthO1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
W [auth P] | PF00227,PF10584 | e6uthP1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
X [auth Q] | PF00227,PF10584 | e6uthQ1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
Y [auth R] | PF00227,PF10584 | e6uthR1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
Z [auth S] | PF00227,PF10584 | e6uthS1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
CA [auth a] | PF02252 | e6utha1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Proteasome activator reg(alpha) (From Topology) | T: Proteasome activator reg(alpha) | F: PF02252 | ECOD (1.6) |
DA [auth b] | PF02252 | e6uthb1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Proteasome activator reg(alpha) (From Topology) | T: Proteasome activator reg(alpha) | F: PF02252 | ECOD (1.6) |
EA [auth c] | PF02252 | e6uthc1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Proteasome activator reg(alpha) (From Topology) | T: Proteasome activator reg(alpha) | F: PF02252 | ECOD (1.6) |
FA [auth d] | PF02252 | e6uthd1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Proteasome activator reg(alpha) (From Topology) | T: Proteasome activator reg(alpha) | F: PF02252 | ECOD (1.6) |
GA [auth e] | PF02252 | e6uthe1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Proteasome activator reg(alpha) (From Topology) | T: Proteasome activator reg(alpha) | F: PF02252 | ECOD (1.6) |
HA [auth f] | PF02252 | e6uthf1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Proteasome activator reg(alpha) (From Topology) | T: Proteasome activator reg(alpha) | F: PF02252 | ECOD (1.6) |
IA [auth g] | PF02252 | e6uthg1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Proteasome activator reg(alpha) (From Topology) | T: Proteasome activator reg(alpha) | F: PF02252 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain | |
PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family | |
PF02252 | Proteasome activator PA28, C-terminal (PA28_C) | Proteasome activator PA28, C-terminal | Proteasome activator 28 (PA28), also known as 11s regulator of REG, binds to the 20S proteasome and simulates peptidase activity in an ATP-independent manner. This entry represents a the C-terminal domain found in PA28 subunits, including PA28alpha/b ... | Domain | |
PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain | |
PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain | |
PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family | |