6U84
Apo full-length rat TRPV2 in nanodiscs, state 1
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ankyrin repeat | 8089701 | 3000154 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Voltage-gated potassium channels | 8089817 | 3000023 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Voltage-gated potassium channels | 8089817 | 3000023 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Ankyrin repeat | 8089701 | 3000154 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Voltage-gated potassium channels | 8089817 | 3000023 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Ankyrin repeat | 8089701 | 3000154 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Voltage-gated potassium channels | 8089817 | 3000023 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Ankyrin repeat | 8089701 | 3000154 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Ank_2 | e6u84A1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ankyrin repeat (From Topology) | T: Ankyrin repeat | F: Ank_2 | ECOD (1.6) |
A | Ion_trans | e6u84A2 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: Ion_trans | ECOD (1.6) |
D | Ank_2 | e6u84D1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ankyrin repeat (From Topology) | T: Ankyrin repeat | F: Ank_2 | ECOD (1.6) |
D | Ion_trans | e6u84D2 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: Ion_trans | ECOD (1.6) |
B | Ank_2 | e6u84B1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ankyrin repeat (From Topology) | T: Ankyrin repeat | F: Ank_2 | ECOD (1.6) |
B | Ion_trans | e6u84B2 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: Ion_trans | ECOD (1.6) |
C | Ank_2 | e6u84C2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ankyrin repeat (From Topology) | T: Ankyrin repeat | F: Ank_2 | ECOD (1.6) |
C | Ion_trans | e6u84C1 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: Ion_trans | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002110 | Ankyrin repeat | Repeat | |
IPR005821 | Ion transport domain | Domain | |
IPR008347 | Transient receptor potential cation channel subfamily V member 1-4 | Family | |
IPR036770 | Ankyrin repeat-containing domain superfamily | Homologous Superfamily | |
IPR024862 | Transient receptor potential cation channel subfamily V | Family |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Ion channel (VIC) superfamily | Transient receptor potential channels |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Channels: Transient Receptor Potential (TRP) | TRPV2 channel full length in nanodiscs, apo state 1 |