6TU5
Influenza A/H7N9 polymerase core (apo)
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth BBB] | PF00602 | e6tu5BBB1 | A: alpha bundles | X: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | H: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | T: helical bundle domain in reverse transcriptase-like polymerases | F: PF00602 | ECOD (1.6) |
B [auth BBB] | PF00602 | e6tu5BBB3 | A: a+b two layers | X: Alpha-beta plaits | H: Adenylyl and guanylyl cyclase catalytic domain-like | T: Adenylyl and guanylyl cyclase catalytic domain-like | F: PF00602 | ECOD (1.6) |
B [auth BBB] | PF00602 | e6tu5BBB2 | A: extended segments | X: RNA polymerase PB1 C-terminal fragment (From Topology) | H: RNA polymerase PB1 C-terminal fragment (From Topology) | T: RNA polymerase PB1 C-terminal fragment | F: PF00602 | ECOD (1.6) |
E [auth EEE] | PF00602 | e6tu5EEE1 | A: alpha bundles | X: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | H: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | T: helical bundle domain in reverse transcriptase-like polymerases | F: PF00602 | ECOD (1.6) |
E [auth EEE] | PF00602 | e6tu5EEE3 | A: a+b two layers | X: Alpha-beta plaits | H: Adenylyl and guanylyl cyclase catalytic domain-like | T: Adenylyl and guanylyl cyclase catalytic domain-like | F: PF00602 | ECOD (1.6) |
E [auth EEE] | PF00602 | e6tu5EEE2 | A: extended segments | X: RNA polymerase PB1 C-terminal fragment (From Topology) | H: RNA polymerase PB1 C-terminal fragment (From Topology) | T: RNA polymerase PB1 C-terminal fragment | F: PF00602 | ECOD (1.6) |
C [auth CCC] | PF20948 | e6tu5CCC1 | A: a+b two layers | X: a+b domain in PB2 (From Topology) | H: a+b domain in PB2 (From Topology) | T: a+b domain in PB2 | F: PF20948 | ECOD (1.6) |
C [auth CCC] | PF20947 | e6tu5CCC2 | A: extended segments | X: RNA polymerase PB2 N-terminal fragment (From Topology) | H: RNA polymerase PB2 N-terminal fragment (From Topology) | T: RNA polymerase PB2 N-terminal fragment | F: PF20947 | ECOD (1.6) |
F [auth FFF] | PF20948 | e6tu5FFF1 | A: a+b two layers | X: a+b domain in PB2 (From Topology) | H: a+b domain in PB2 (From Topology) | T: a+b domain in PB2 | F: PF20948 | ECOD (1.6) |
F [auth FFF] | PF20947 | e6tu5FFF2 | A: extended segments | X: RNA polymerase PB2 N-terminal fragment (From Topology) | H: RNA polymerase PB2 N-terminal fragment (From Topology) | T: RNA polymerase PB2 N-terminal fragment | F: PF20947 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth BBB], E [auth EEE] | PF00602 | Influenza RNA-dependent RNA polymerase subunit PB1 (Flu_PB1) | Influenza RNA-dependent RNA polymerase subunit PB1 | - | Family |
C [auth CCC], F [auth FFF] | PF20948 | Influenza RNA polymerase PB2 second domain (Flu_PB2_2nd) | Influenza RNA polymerase PB2 second domain | Influenza virus encodes a large, multidomain RNA-dependent RNA polymerase that can both transcribe and replicate the viral RNA genome. In influenza virus, the polymerase is composed of three polypeptides: PB1, PB2 and PA/P3. PB1 houses the polymerase ... | Domain |
C [auth CCC], F [auth FFF] | PF20947 | Influenza RNA polymerase PB2 N-terminal region (Flu_PB2_1st) | Influenza RNA polymerase PB2 N-terminal region | - | Family |