6TR1
Native cytochrome c6 from Thermosynechococcus elongatus in space group H3
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6tr1a_ | All alpha proteins | Cytochrome c | Cytochrome c | monodomain cytochrome c | automated matches | (Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ], | SCOPe (2.08) |
B [auth C] | d6tr1c_ | All alpha proteins | Cytochrome c | Cytochrome c | monodomain cytochrome c | automated matches | (Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ], | SCOPe (2.08) |
C [auth E] | d6tr1e_ | All alpha proteins | Cytochrome c | Cytochrome c | monodomain cytochrome c | automated matches | (Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Cytochrome c | 8093598 | 3000815 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2 Family | Monodomain cytochrome c | 8093597 | 4000635 | SCOP2 (2022-06-29) |
B [auth C] | SCOP2 Superfamily | Cytochrome c | 8093598 | 3000815 | SCOP2 (2022-06-29) |
C [auth E] | SCOP2B Superfamily | Cytochrome c | 8093598 | 3000815 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Cytochrome_CBB3 | e6tr1A1 | A: alpha arrays | X: Cytochrome c-like | H: Cytochrome c (From Topology) | T: Cytochrome c | F: Cytochrome_CBB3 | ECOD (1.6) |
B [auth C] | Cytochrome_CBB3 | e6tr1C1 | A: alpha arrays | X: Cytochrome c-like | H: Cytochrome c (From Topology) | T: Cytochrome c | F: Cytochrome_CBB3 | ECOD (1.6) |
C [auth E] | Cytochrome_CBB3 | e6tr1E1 | A: alpha arrays | X: Cytochrome c-like | H: Cytochrome c (From Topology) | T: Cytochrome c | F: Cytochrome_CBB3 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.760.10 | Mainly Alpha | Orthogonal Bundle | Cytochrome Bc1 Complex | Chain D, domain 2 | CATH (utative) |
B [auth C] | 1.10.760.10 | Mainly Alpha | Orthogonal Bundle | Cytochrome Bc1 Complex | Chain D, domain 2 | CATH (utative) |
C [auth E] | 1.10.760.10 | Mainly Alpha | Orthogonal Bundle | Cytochrome Bc1 Complex | Chain D, domain 2 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13442 | Cytochrome C oxidase, cbb3-type, subunit III (Cytochrome_CBB3) | Cytochrome C oxidase, cbb3-type, subunit III | - | Domain | |
B [auth C] | PF13442 | Cytochrome C oxidase, cbb3-type, subunit III (Cytochrome_CBB3) | Cytochrome C oxidase, cbb3-type, subunit III | - | Domain |
C [auth E] | PF13442 | Cytochrome C oxidase, cbb3-type, subunit III (Cytochrome_CBB3) | Cytochrome C oxidase, cbb3-type, subunit III | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036909 | Cytochrome c-like domain superfamily | Homologous Superfamily | |
IPR009056 | Cytochrome c-like domain | Domain | |
IPR023655 | Cytochrome c6 | Family | |
IPR008168 | Cytochrome c, class IC | Family | |
B [auth C] | IPR036909 | Cytochrome c-like domain superfamily | Homologous Superfamily |
B [auth C] | IPR009056 | Cytochrome c-like domain | Domain |
B [auth C] | IPR023655 | Cytochrome c6 | Family |
B [auth C] | IPR008168 | Cytochrome c, class IC | Family |
C [auth E] | IPR036909 | Cytochrome c-like domain superfamily | Homologous Superfamily |
C [auth E] | IPR009056 | Cytochrome c-like domain | Domain |
C [auth E] | IPR023655 | Cytochrome c6 | Family |
C [auth E] | IPR008168 | Cytochrome c, class IC | Family |
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
B [auth C] | MEN | Parent Component: ASN :  AA0070 :  N4-methyl-L-asparagine MOD:00079 |