6TQ0
Crystal structure of the human Arc N-lobe bound to repeat peptide 5 from GKAP
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Retrotrans_gag_like | e6tq0A1 | A: alpha bundles | X: Retrovirus capsid protein | H: Retrovirus capsid protein N-terminal domain (From Topology) | T: Retrovirus capsid protein N-terminal domain | F: Retrotrans_gag_like | ECOD (1.6) |
C | Retrotrans_gag_like | e6tq0C1 | A: alpha bundles | X: Retrovirus capsid protein | H: Retrovirus capsid protein N-terminal domain (From Topology) | T: Retrovirus capsid protein N-terminal domain | F: Retrotrans_gag_like | ECOD (1.6) |
E | Retrotrans_gag_like | e6tq0E1 | A: alpha bundles | X: Retrovirus capsid protein | H: Retrovirus capsid protein N-terminal domain (From Topology) | T: Retrovirus capsid protein N-terminal domain | F: Retrotrans_gag_like | ECOD (1.6) |
G | Retrotrans_gag_like | e6tq0G1 | A: alpha bundles | X: Retrovirus capsid protein | H: Retrovirus capsid protein N-terminal domain (From Topology) | T: Retrovirus capsid protein N-terminal domain | F: Retrotrans_gag_like | ECOD (1.6) |
I | Retrotrans_gag_like | e6tq0I1 | A: alpha bundles | X: Retrovirus capsid protein | H: Retrovirus capsid protein N-terminal domain (From Topology) | T: Retrovirus capsid protein N-terminal domain | F: Retrotrans_gag_like | ECOD (1.6) |
K | Retrotrans_gag_like | e6tq0K1 | A: alpha bundles | X: Retrovirus capsid protein | H: Retrovirus capsid protein N-terminal domain (From Topology) | T: Retrovirus capsid protein N-terminal domain | F: Retrotrans_gag_like | ECOD (1.6) |
M | Retrotrans_gag_like | e6tq0M1 | A: alpha bundles | X: Retrovirus capsid protein | H: Retrovirus capsid protein N-terminal domain (From Topology) | T: Retrovirus capsid protein N-terminal domain | F: Retrotrans_gag_like | ECOD (1.6) |
O | Retrotrans_gag_like | e6tq0O1 | A: alpha bundles | X: Retrovirus capsid protein | H: Retrovirus capsid protein N-terminal domain (From Topology) | T: Retrovirus capsid protein N-terminal domain | F: Retrotrans_gag_like | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21395 | Activity-regulated cytoskeleton-associated protein, capsid domain (Arc_capsid_dom) | Activity-regulated cytoskeleton-associated protein, capsid domain | This domain is found in Activity-regulated cytoskeleton-associated protein from humans (Arc), a master regulator of synaptic plasticity that promotes endocytosis of AMPA receptors and a postsynaptic mediator of activity-dependent synapse elimination ... | Domain | |