Annotations: 6TI3

Apo-SHMT from Streptococcus thermophilus Tyr55Ser variant in complex with D-Threonine

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d6ti3a_	Alpha and beta proteins (a/b)	PLP-dependent transferase-like	PLP-dependent transferases	GABA-aminotransferase-like	automated matches	(Streptococcus thermophilus ) [TaxId: 1308 ],	SCOPe (2.08)
B [auth C]	d6ti3c_	Alpha and beta proteins (a/b)	PLP-dependent transferase-like	PLP-dependent transferases	GABA-aminotransferase-like	automated matches	(Streptococcus thermophilus ) [TaxId: 1308 ],	SCOPe (2.08)
D	d6ti3d_	Alpha and beta proteins (a/b)	PLP-dependent transferase-like	PLP-dependent transferases	GABA-aminotransferase-like	automated matches	(Streptococcus thermophilus ) [TaxId: 1308 ],	SCOPe (2.08)
C [auth B]	d6ti3b_	Alpha and beta proteins (a/b)	PLP-dependent transferase-like	PLP-dependent transferases	GABA-aminotransferase-like	automated matches	(Streptococcus thermophilus ) [TaxId: 1308 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	PLP-dependent transferases	8075102	3000954	SCOP2B (2022-06-29)
B [auth C]	SCOP2B Superfamily	PLP-dependent transferases	8075102	3000954	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	PLP-dependent transferases	8075102	3000954	SCOP2B (2022-06-29)
C [auth B]	SCOP2B Superfamily	PLP-dependent transferases	8075102	3000954	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A		e6ti3A1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F:	ECOD (v295.2)
B [auth C]		e6ti3C1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F:	ECOD (v295.2)
D		e6ti3D1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F:	ECOD (v295.2)
C [auth B]		e6ti3B1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F:	ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B [auth C], C [auth B], D	Serine hydroxymethyltransferase	vitamin binding vitamin B6 binding pyridoxal phosphate binding ion binding binding anion binding heterocyclic compound binding small molecule binding transferase activity, transferring one-carbon groups glycine hydroxymethyltransferase activity transferase activity hydroxymethyl-, formyl- and related transferase activity catalytic activity	folic acid-containing compound biosynthetic process modified amino acid biosynthetic process modified amino acid metabolic process biosynthetic process folic acid-containing compound metabolic process tetrahydrofolate interconversion pteridine-containing compound biosynthetic process metabolic process cellular process small molecule metabolic process tetrahydrofolate biosynthetic process pteridine-containing compound metabolic process tetrahydrofolate metabolic process one-carbon metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B [auth C], C [auth B], D	IPR015424	Pyridoxal phosphate-dependent transferase	Homologous Superfamily
A, B [auth C], C [auth B], D	IPR015421	Pyridoxal phosphate-dependent transferase, major domain	Homologous Superfamily
A, B [auth C], C [auth B], D	IPR015422	Pyridoxal phosphate-dependent transferase, small domain	Homologous Superfamily
A, B [auth C], C [auth B], D	IPR039429	Serine hydroxymethyltransferase-like domain	Domain
A, B [auth C], C [auth B], D	IPR001085	Serine hydroxymethyltransferase	Family
A, B [auth C], C [auth B], D	IPR049943	Serine hydroxymethyltransferase-like	Family
A, B [auth C], C [auth B], D	IPR019798	Serine hydroxymethyltransferase, pyridoxal phosphate binding site	Binding Site

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