6TAQ
Structure of the dArc2 capsid
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | EUF08046 | e6taqB1 | A: alpha bundles | X: Retrovirus capsid protein | H: Retrovirus capsid protein-C (From Topology) | T: Retrovirus capsid protein-C | F: EUF08046 | ECOD (1.6) |
A [auth B] | UNK_F_TYPE | e6taqB2 | A: alpha bundles | X: Retrovirus capsid protein | H: Retrovirus capsid protein N-terminal domain (From Topology) | T: Retrovirus capsid protein N-terminal domain | F: UNK_F_TYPE | ECOD (1.6) |
B [auth A] | EUF08046 | e6taqA1 | A: alpha bundles | X: Retrovirus capsid protein | H: Retrovirus capsid protein-C (From Topology) | T: Retrovirus capsid protein-C | F: EUF08046 | ECOD (1.6) |
B [auth A] | UNK_F_TYPE | e6taqA2 | A: alpha bundles | X: Retrovirus capsid protein | H: Retrovirus capsid protein N-terminal domain (From Topology) | T: Retrovirus capsid protein N-terminal domain | F: UNK_F_TYPE | ECOD (1.6) |
C | EUF08046 | e6taqC1 | A: alpha bundles | X: Retrovirus capsid protein | H: Retrovirus capsid protein-C (From Topology) | T: Retrovirus capsid protein-C | F: EUF08046 | ECOD (1.6) |
C | UNK_F_TYPE | e6taqC2 | A: alpha bundles | X: Retrovirus capsid protein | H: Retrovirus capsid protein N-terminal domain (From Topology) | T: Retrovirus capsid protein N-terminal domain | F: UNK_F_TYPE | ECOD (1.6) |
D | EUF08046 | e6taqD1 | A: alpha bundles | X: Retrovirus capsid protein | H: Retrovirus capsid protein-C (From Topology) | T: Retrovirus capsid protein-C | F: EUF08046 | ECOD (1.6) |
D | UNK_F_TYPE | e6taqD2 | A: alpha bundles | X: Retrovirus capsid protein | H: Retrovirus capsid protein N-terminal domain (From Topology) | T: Retrovirus capsid protein N-terminal domain | F: UNK_F_TYPE | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A], C, D | PF19259 | Ty3 transposon capsid-like protein (Ty3_capsid) | Ty3 transposon capsid-like protein | This entry corresponds to the capsid protein found in the Ty3 transposons of yeast as well as other transposable elements. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth B], B [auth A], C, D | Activity-regulated cytoskeleton associated protein 2 | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth A], C, D | IPR045358 | Ty3 transposon capsid-like protein | Domain |