6T4V
Crystal structure of 2-methylisocitrate lyase (PrpB) from Pseudomonas aeruginosa in apo form.
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth C] | SCOP2B Superfamily | Phosphoenolpyruvate/pyruvate domain | 8100534 | 3000510 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2B Superfamily | Phosphoenolpyruvate/pyruvate domain | 8100534 | 3000510 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2 Family | Phosphoenolpyruvate mutase/Isocitrate lyase-like | 8100533 | 4003532 | SCOP2 (2022-06-29) |
C [auth B] | SCOP2 Superfamily | Phosphoenolpyruvate/pyruvate domain | 8100534 | 3000510 | SCOP2 (2022-06-29) |
D | SCOP2B Superfamily | Phosphoenolpyruvate/pyruvate domain | 8100534 | 3000510 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth C] | PEP_mutase | e6t4vC1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PEP_mutase | ECOD (1.6) |
B [auth A] | PEP_mutase | e6t4vA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PEP_mutase | ECOD (1.6) |
C [auth B] | PEP_mutase | e6t4vB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PEP_mutase | ECOD (1.6) |
D | PEP_mutase | e6t4vD1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PEP_mutase | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth C], B [auth A], C [auth B], D | PF13714 | Phosphoenolpyruvate phosphomutase (PEP_mutase) | Phosphoenolpyruvate phosphomutase | This domain includes the enzyme Phosphoenolpyruvate phosphomutase (EC:5.4.2.9). This protein Swiss:O86937 has been characterised as catalysing the formation of a carbon-phosphorus bond by converting phosphoenolpyruvate (PEP) to phosphonopyruvate (P-P ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth C], B [auth A], C [auth B], D | IPR015813 | Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily | Homologous Superfamily |
A [auth C], B [auth A], C [auth B], D | IPR018523 | Isocitrate lyase/phosphorylmutase, conserved site | Conserved Site |
A [auth C], B [auth A], C [auth B], D | IPR012695 | 2-methylisocitrate lyase | Family |
A [auth C], B [auth A], C [auth B], D | IPR039556 | ICL/PEPM domain | Domain |
A [auth C], B [auth A], C [auth B], D | IPR040442 | Pyruvate kinase-like domain superfamily | Homologous Superfamily |