Glycoside hydrolase family 109 from Akkermansia muciniphila in complex with GalNAc and NAD+.


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AHerpes_U34e6t2bA01 A: beta barrelsX: Histone-likeH: all-alpha NTP pyrophosphatasesT: Hypothetical protein AF_0060F: Herpes_U34ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF01408Oxidoreductase family, NAD-binding Rossmann fold (GFO_IDH_MocA)Oxidoreductase family, NAD-binding Rossmann foldThis entry represents the N-terminal domain of a group of enzymes that utilise NADP or NAD, known as the GFO/IDH/MOCA family, which includes enzymes that catalyse different chemical reactions such as oxidation and reduction of carbohydrates, oxidatio ...This entry represents the N-terminal domain of a group of enzymes that utilise NADP or NAD, known as the GFO/IDH/MOCA family, which includes enzymes that catalyse different chemical reactions such as oxidation and reduction of carbohydrates, oxidation of trans-dihydrodiols, reduction of biliverdin and hydrolysation of glycosidic bonds. This domain adopts a a typical Rossmann fold.
Domain
A, B, C, D
PF21252Glycosyl hydrolase 109, C-terminal domain (Glyco_hydro_109_C)Glycosyl hydrolase 109, C-terminal domainThis domain is found at the C-terminal end of the group of bacterial glycosyl hydrolases 109, including Alpha-N-acetylgalactosaminidase from Elizabethkingia meningoseptica. This domain shows a large open-faced, seven-stranded, anti-parallel beta-shee ...This domain is found at the C-terminal end of the group of bacterial glycosyl hydrolases 109, including Alpha-N-acetylgalactosaminidase from Elizabethkingia meningoseptica. This domain shows a large open-faced, seven-stranded, anti-parallel beta-sheet, adjacent to nine alpha-helices and an alpha-helical bundle covering the dinucleotide-binding tunnel [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage