6SMP
AntDE:AntF (holo): type II PKS acyl-carrier protein in complex with its ketosynthase bound to the hexaketide
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d6smpb1 | Alpha and beta proteins (a/b) | Thiolase-like | Thiolase-like | automated matches | automated matches | (Photorhabdus laumondii subsp. laumondii TTO1 ) [TaxId: 243265 ], | SCOPe (2.08) |
E | d6smpe1 | Alpha and beta proteins (a/b) | Thiolase-like | Thiolase-like | automated matches | automated matches | (Photorhabdus laumondii subsp. laumondii TTO1 ) [TaxId: 243265 ], | SCOPe (2.08) |
H | d6smph1 | Alpha and beta proteins (a/b) | Thiolase-like | Thiolase-like | automated matches | automated matches | (Photorhabdus laumondii subsp. laumondii TTO1 ) [TaxId: 243265 ], | SCOPe (2.08) |
K | d6smpk1 | Alpha and beta proteins (a/b) | Thiolase-like | Thiolase-like | automated matches | automated matches | (Photorhabdus laumondii subsp. laumondii TTO1 ) [TaxId: 243265 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2 Family | Thiolase-related | 8099997 | 4000245 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Thiolase-like | 8099998 | 3000122 | SCOP2 (2022-06-29) |
E | SCOP2B Superfamily | Thiolase-like | 8099998 | 3000122 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Thiolase-like | 8099998 | 3000122 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Thiolase-like | 8099998 | 3000122 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PP-binding | e6smpA1 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: PP-binding | ECOD (1.6) |
D | PP-binding | e6smpD1 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: PP-binding | ECOD (1.6) |
G | PP-binding | e6smpG1 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: PP-binding | ECOD (1.6) |
J | PP-binding | e6smpJ1 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: PP-binding | ECOD (1.6) |
B | ketoacyl-synt | e6smpB1 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: ketoacyl-synt | ECOD (1.6) |
B | Ketoacyl-synt_C_1 | e6smpB2 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: Ketoacyl-synt_C_1 | ECOD (1.6) |
E | ketoacyl-synt | e6smpE2 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: ketoacyl-synt | ECOD (1.6) |
E | Ketoacyl-synt_C_1 | e6smpE1 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: Ketoacyl-synt_C_1 | ECOD (1.6) |
H | ketoacyl-synt | e6smpH2 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: ketoacyl-synt | ECOD (1.6) |
H | Ketoacyl-synt_C_1 | e6smpH1 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: Ketoacyl-synt_C_1 | ECOD (1.6) |
K | ketoacyl-synt | e6smpK1 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: ketoacyl-synt | ECOD (1.6) |
K | Ketoacyl-synt_C_1 | e6smpK2 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: Ketoacyl-synt_C_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.40.47.10 | Alpha Beta | 3-Layer(aba) Sandwich | Peroxisomal Thiolase | Chain A, domain 1 | CATH (utative) |
E | 3.40.47.10 | Alpha Beta | 3-Layer(aba) Sandwich | Peroxisomal Thiolase | Chain A, domain 1 | CATH (utative) |
H | 3.40.47.10 | Alpha Beta | 3-Layer(aba) Sandwich | Peroxisomal Thiolase | Chain A, domain 1 | CATH (utative) |
K | 3.40.47.10 | Alpha Beta | 3-Layer(aba) Sandwich | Peroxisomal Thiolase | Chain A, domain 1 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00550 | Phosphopantetheine attachment site (PP-binding) | Phosphopantetheine attachment site | A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes memb ... | Domain | |
PF02801 | Beta-ketoacyl synthase, C-terminal domain (Ketoacyl-synt_C) | Beta-ketoacyl synthase, C-terminal domain | The structure of beta-ketoacyl synthase is similar to that of the thiolase family (Pfam:PF00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. | Domain | |
PF00109 | Beta-ketoacyl synthase, N-terminal domain (ketoacyl-synt) | Beta-ketoacyl synthase, N-terminal domain | The structure of beta-ketoacyl synthase is similar to that of the thiolase family (Pfam:PF00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains m ... | Domain | |
PF00109 | Beta-ketoacyl synthase, N-terminal domain (ketoacyl-synt) | Beta-ketoacyl synthase, N-terminal domain | The structure of beta-ketoacyl synthase is similar to that of the thiolase family (Pfam:PF00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains m ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009081 | Phosphopantetheine binding ACP domain | Domain | |
IPR036736 | ACP-like superfamily | Homologous Superfamily | |
IPR016039 | Thiolase-like | Homologous Superfamily | |
IPR014031 | Beta-ketoacyl synthase, C-terminal | Domain | |
IPR000794 | Beta-ketoacyl synthase | Family | |
IPR014030 | Beta-ketoacyl synthase-like, N-terminal | Domain | |
IPR020841 | Polyketide synthase, beta-ketoacyl synthase domain | Domain | |
IPR016039 | Thiolase-like | Homologous Superfamily | |
IPR000794 | Beta-ketoacyl synthase | Family | |
IPR014030 | Beta-ketoacyl synthase-like, N-terminal | Domain |