6SLO
Crystal structure of PUF60 UHM domain in complex with 7,8 dimethoxyperphenazine
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | RNA-binding domain, RBD | 8065225 | 3000110 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Thioltransferase | 8096057 | 4000237 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Thioredoxin-like | 8096058 | 3000031 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | RNA-binding domain, RBD | 8065225 | 3000110 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | RNA-binding domain, RBD | 8065225 | 3000110 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | RNA-binding domain, RBD | 8065225 | 3000110 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | RRM_1_9 | e6sloA1 | A: a+b two layers | X: Alpha-beta plaits | H: RNA-binding domain, RBD (From Topology) | T: RNA-binding domain, RBD | F: RRM_1_9 | ECOD (1.6) |
A | Thioredoxin | e6sloA2 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: Thioredoxin | ECOD (1.6) |
B | RRM_1_9 | e6sloB1 | A: a+b two layers | X: Alpha-beta plaits | H: RNA-binding domain, RBD (From Topology) | T: RNA-binding domain, RBD | F: RRM_1_9 | ECOD (1.6) |
B | Thioredoxin | e6sloB2 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: Thioredoxin | ECOD (1.6) |
C | RRM_1_9 | e6sloC2 | A: a+b two layers | X: Alpha-beta plaits | H: RNA-binding domain, RBD (From Topology) | T: RNA-binding domain, RBD | F: RRM_1_9 | ECOD (1.6) |
C | Thioredoxin | e6sloC1 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: Thioredoxin | ECOD (1.6) |
D | RRM_1_9 | e6sloD2 | A: a+b two layers | X: Alpha-beta plaits | H: RNA-binding domain, RBD (From Topology) | T: RNA-binding domain, RBD | F: RRM_1_9 | ECOD (1.6) |
D | Thioredoxin | e6sloD1 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: Thioredoxin | ECOD (1.6) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR003954 | RNA recognition motif domain, eukaryote | Domain | |
IPR000504 | RNA recognition motif domain | Domain | |
IPR034211 | PUF60, RNA recognition motif 2 | Domain | |
IPR051974 | Poly(U)-binding-splicing regulator | Family | |
IPR006532 | Poly-U binding splicing factor, PUF60-like | Family | |
IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily | Homologous Superfamily | |
IPR034209 | PUF60, RNA recognition motif 1 | Domain | |
IPR034212 | PUF60, RNA recognition motif 3 | Domain | |
IPR035979 | RNA-binding domain superfamily | Homologous Superfamily |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
Q9UHX1 | :