Crystal structure of the guanylate cyclase domain of RhGC from Catenaria anguillulae in complex with GTP
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d6sirb_ | Alpha and beta proteins (a+b) | Ferredoxin-like | Nucleotide cyclase | automated matches | automated matches | (Catenaria anguillulae PL171 ) [TaxId: 765915 ], | SCOPe (2.08) |
| C [auth D] | d6sird_ | Alpha and beta proteins (a+b) | Ferredoxin-like | Nucleotide cyclase | automated matches | automated matches | (Catenaria anguillulae PL171 ) [TaxId: 765915 ], | SCOPe (2.08) |
| D [auth C] | d6sirc_ | Alpha and beta proteins (a+b) | Ferredoxin-like | Nucleotide cyclase | automated matches | automated matches | (Catenaria anguillulae PL171 ) [TaxId: 765915 ], | SCOPe (2.08) |
| A | d6sira_ | Alpha and beta proteins (a+b) | Ferredoxin-like | Nucleotide cyclase | automated matches | automated matches | (Catenaria anguillulae PL171 ) [TaxId: 765915 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | Nucleotide cyclase/DNA polymerase palm domain-like | 8064534 | 3001272 | SCOP2B (2022-06-29) |
| C [auth D] | SCOP2B Superfamily | Nucleotide cyclase/DNA polymerase palm domain-like | 8064534 | 3001272 | SCOP2B (2022-06-29) |
| D [auth C] | SCOP2B Superfamily | Nucleotide cyclase/DNA polymerase palm domain-like | 8064534 | 3001272 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Nucleotide cyclase/DNA polymerase palm domain-like | 8064534 | 3001272 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Ribosomal_S19 | e6sirB1 | A: alpha arrays | X: Nat/Ivy | H: Acyl-CoA N-acyltransferases (Nat) | T: Acyl-CoA N-acyltransferases (Nat) | F: Ribosomal_S19 | ECOD (v295.2) |
| C [auth D] | Ribosomal_S19 | e6sirD1 | A: alpha arrays | X: Nat/Ivy | H: Acyl-CoA N-acyltransferases (Nat) | T: Acyl-CoA N-acyltransferases (Nat) | F: Ribosomal_S19 | ECOD (v295.2) |
| D [auth C] | Ribosomal_S19 | e6sirC1 | A: alpha arrays | X: Nat/Ivy | H: Acyl-CoA N-acyltransferases (Nat) | T: Acyl-CoA N-acyltransferases (Nat) | F: Ribosomal_S19 | ECOD (v295.2) |
| A | Ribosomal_S19 | e6sirA1 | A: alpha arrays | X: Nat/Ivy | H: Acyl-CoA N-acyltransferases (Nat) | T: Acyl-CoA N-acyltransferases (Nat) | F: Ribosomal_S19 | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.30.70.1230 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Nucleotide cyclase, GGDEF domain | CATH (utative) |
| C [auth D] | 3.30.70.1230 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Nucleotide cyclase, GGDEF domain | CATH (utative) |
| D [auth C] | 3.30.70.1230 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Nucleotide cyclase, GGDEF domain | CATH (utative) |
| A | 3.30.70.1230 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Nucleotide cyclase, GGDEF domain | CATH (utative) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A, B, C [auth D], D [auth C] | IPR050401 | Cyclic nucleotide synthase | Family |
| A, B, C [auth D], D [auth C] | IPR001054 | Adenylyl cyclase class-3/4/guanylyl cyclase | Domain |
| A, B, C [auth D], D [auth C] | IPR029787 | Nucleotide cyclase | Homologous Superfamily |