6RHE
CpOGA D298N in complex with hOGA-derived S-GlcNAc peptide
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | beta-N-acetylhexosaminidase-like domain | 8038626 | 3000192 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | (Trans)glycosidases | 8038623 | 3000313 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Hyaluronidase post-catalytic domain-like | 8038622 | 3001475 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | NagJ_C | e6rheA1 | A: alpha bundles | X: Hyaluronidase domain-like | H: Hyaluronidase post-catalytic domain-like (From Topology) | T: Hyaluronidase post-catalytic domain-like | F: NagJ_C | ECOD (1.6) |
A | NAGidase | e6rheA2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: NAGidase | ECOD (1.6) |
A | Glyco_hydro_20b | e6rheA3 | A: mixed a+b and a/b | X: Zincin-like | H: beta-N-acetylhexosaminidase-like domain (From Topology) | T: beta-N-acetylhexosaminidase-like domain | F: Glyco_hydro_20b | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.379.10 | Alpha Beta | 2-Layer Sandwich | Chitobiase | domain 2 | CATH (utative) |
A | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (utative) |
A | 1.20.58.460 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21774 | Hyaluronidase post-catalytic domain-like (NagJ_C) | Hyaluronidase post-catalytic domain-like | This domain is located at the C-terminus of proteins that are members of family 84 glycoside hydrolases.These enzymes directly hydrolyse O-GlcNAcylated peptides/proteins. This domain folds into a five helical bundle with up-and-down topology. It may ... | Domain | |
PF02838 | Glycosyl hydrolase family 20, domain 2 (Glyco_hydro_20b) | Glycosyl hydrolase family 20, domain 2 | This domain has a zincin-like fold. | Domain | |
PF07555 | beta-N-acetylglucosaminidase (NAGidase) | beta-N-acetylglucosaminidase | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR051822 | Glycosyl Hydrolase Family 84 | Family | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR003961 | Fibronectin type III | Domain | |
IPR029018 | Beta-hexosaminidase-like, domain 2 | Homologous Superfamily | |
IPR011496 | Beta-N-acetylglucosaminidase, catalytic domain | Domain | |
IPR008965 | CBM2/CBM3, carbohydrate-binding domain superfamily | Homologous Superfamily | |
IPR008979 | Galactose-binding-like domain superfamily | Homologous Superfamily | |
IPR002102 | Cellulosome anchoring protein, cohesin domain | Domain | |
IPR000421 | Coagulation factor 5/8, C-terminal domain | Domain | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR015882 | Beta-hexosaminidase, bacterial type, N-terminal | Domain | |
IPR049019 | NagJ-like, helical domain | Domain | |
IPR036116 | Fibronectin type III superfamily | Homologous Superfamily |
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
B [auth D] | ACE | AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 :  N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359 | : 
B [auth D] | NH2 | AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 , AA0081 , AA0083 , AA0084 , AA0086 , AA0087 , AA0088 , AA0090 , AA0091 , AA0092 , AA0093 , AA0095 , AA0096 , AA0097 , AA0098 , AA0099 , AA0100 :  N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359 , L-alanine amide MOD:00090 , L-asparagine amide MOD:00092 , L-aspartic acid 1-amide MOD:00093 , L-glutamine amide MOD:00095 , L-glutamic acid 1-amide MOD:00096 , glycine amide MOD:00097 , L-isoleucine amide MOD:00099 , L-leucine amide MOD:00100 , L-lysine amide MOD:00101 , L-methionine amide MOD:00102 , L-proline amide MOD:00104 , L-serine amide MOD:00105 , L-threonine amide MOD:00106 , L-tryptophan amide MOD:00107 , L-tyrosine amide MOD:00108 , L-valine amide MOD:00109 | :