Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF09699e6r2qA2 A: few secondary structure elementsX: Multiheme cytochromesH: Cytochrome c3-like (From Topology)T: Cytochrome c3-likeF: PF09699ECOD (1.6)
APF22678e6r2qA1 A: few secondary structure elementsX: Multiheme cytochromesH: Di-heme elbow motif (From Topology)T: Di-heme elbow motifF: PF22678ECOD (1.6)
BPF11854e6r2qB1 A: beta barrelsX: Outer membrane meander beta-barrelsH: PorinsT: Ligand-gated protein channelF: PF11854ECOD (1.6)
CF_UNCLASSIFIEDe6r2qC1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: F_UNCLASSIFIEDECOD (1.6)
CPF22111e6r2qC4 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF22111ECOD (1.6)
CPF22113e6r2qC2 A: few secondary structure elementsX: Multiheme cytochromesH: Outer membrane cytochrome MtrF (From Topology)T: Outer membrane cytochrome MtrFF: PF22113ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF09699Doubled CXXCH motif (Paired_CXXCH_1) (Paired_CXXCH_1)Doubled CXXCH motif (Paired_CXXCH_1)This entry represents a domain of about 41 amino acids that contains, among other motifs, two copies of the motif CXXCH associated with haem binding. This domain is predicted to be a high molecular weight c-type cytochrome and is often found in multi ...This entry represents a domain of about 41 amino acids that contains, among other motifs, two copies of the motif CXXCH associated with haem binding. This domain is predicted to be a high molecular weight c-type cytochrome and is often found in multiple copies. Members are found mostly in species of Shewanella, Geobacter, and Vibrio.
Domain
PF22678Cytochrome c-type protein NrfB-like (Cytochrom_c_NrfB-like)Cytochrome c-type protein NrfB-likeThis entry includes Cytochrome c-type protein NrfB and similar proteins, which plays a role in nitrite reduction. These proteins contain several copies of the CXXCH haem-binding motif [1-5].Domain
PF11854Putative outer membrane beta-barrel porin, MtrB/PioB (MtrB_PioB)Putative outer membrane beta-barrel porin, MtrB/PioB- Family
PF22113Outer membrane cytochrome MtrC/MtrF-like, domains II/IV (Mtrc-MtrF_II-IV_dom)Outer membrane cytochrome MtrC/MtrF-like, domains II/IVThis entry includes decaheme cytochrome c component MtrC from the MtrCAB complex and its homologues MtrF (which is part of the MtrFDE complex) and OmcA. In Shewanella oneidensis, these proteins are located at the bacterial cell surface at the termini ...This entry includes decaheme cytochrome c component MtrC from the MtrCAB complex and its homologues MtrF (which is part of the MtrFDE complex) and OmcA. In Shewanella oneidensis, these proteins are located at the bacterial cell surface at the termini of trans-outer-membrane electron transfer conduits and allow the utilization of extracellular mineral forms of iron and manganese as respiratory electron acceptors [5,6]. MtrC/MtrF/OmcA consist of four domains: domain I and III containing seven antiparallel beta-strands in an extended Greek key topology; domains II and IV each bind five tightly packed hemes covalently attached to the Cys residues of the five CXXCH motifs in each domain and form the central core, flanked by domains I (Pfam:PF22111) and III [5,6]. This entry represents domains II and IV.
Domain
PF22111Decaheme cytochrome c component MtrC/MtrF N-terminal domain (MtrC-MtrF_N)Decaheme cytochrome c component MtrC/MtrF N-terminal domainThis entry represents the N-terminal domain of the decaheme cytochrome c component MtrC from the MtrCAB complex and its homologue MtrF, which is part of the MtrFDE complex. In Shewanella oneidensis, these proteins are at bacterial cell surface at the ...This entry represents the N-terminal domain of the decaheme cytochrome c component MtrC from the MtrCAB complex and its homologue MtrF, which is part of the MtrFDE complex. In Shewanella oneidensis, these proteins are at bacterial cell surface at the termini of trans-outer-membrane electron transfer conduits and allow the utilization of extracellular mineral forms of iron and manganese as respiratory electron acceptors [1-4]. MtrC/MtrF consist of four domains: domain I and III containing seven antiparallel beta-strands in an extended Greek key topology; domains II and IV each bind five tightly packed hemes covalently attached to the Cys residues of the five CXXCH motifs in each domain and form the central core, flanked by domains I and III [1-4]. This entry represents domain I (N-terminal) of MtrC/MtrF.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Cystathionine beta-synthase - -
Uncharacterized protein- -
Decaheme c-type cytochrome, OmcA/MtrC family - -

Membrane Protein Annotation: OPM OPM Database Homepage

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage