6QLD
Structure of inner kinetochore CCAN-Cenp-A complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
P [auth b] | SCOP2B Superfamily | Core histone-like | 8036586 | 3001387 | SCOP2B (2021-05-27) |
S [auth f] | SCOP2B Superfamily | Core histone-like | 8036586 | 3001387 | SCOP2B (2021-05-27) |
Q [auth d] | SCOP2B Superfamily | Core histone-like | 8036590 | 3001387 | SCOP2B (2021-05-27) |
T [auth g] | SCOP2B Superfamily | Core histone-like | 8036588 | 3001387 | SCOP2B (2021-05-27) |
U [auth h] | SCOP2B Superfamily | Core histone-like | 8066285 | 3001387 | SCOP2B (2021-05-27) |
V [auth i] | SCOP2B Superfamily | Core histone-like | 8036588 | 3001387 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
O [auth a] | PF00125 | e6qlda1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
P [auth b] | PF15511 | e6qldb1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF15511 | ECOD (1.6) |
S [auth f] | PF15511 | e6qldf1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF15511 | ECOD (1.6) |
Q [auth d] | PF00125 | e6qldd1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
R [auth e] | PF00125 | e6qlde1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
T [auth g] | PF00125,PF16211 | e6qldg1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125,PF16211 | ECOD (1.6) |
U [auth h] | PF00125 | e6qldh1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
V [auth i] | PF00125,PF16211 | e6qldi1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125,PF16211 | ECOD (1.6) |
G [auth L] | F_UNCLASSIFIED | e6qldL1 | A: a+b two layers | X: Recombination-associated protein rdgC (From Topology) | H: Recombination-associated protein rdgC (From Topology) | T: Recombination-associated protein rdgC | F: F_UNCLASSIFIED | ECOD (1.6) |
I [auth O] | F_UNCLASSIFIED | e6qldO2 | A: a+b two layers | X: Kinetochore globular domain-like (From Topology) | H: Kinetochore globular domain-like (From Topology) | T: Kinetochore globular domain-like | F: F_UNCLASSIFIED | ECOD (1.6) |
I [auth O] | PF09496 | e6qldO1 | A: a+b two layers | X: Kinetochore globular domain-like (From Topology) | H: Kinetochore globular domain-like (From Topology) | T: Kinetochore globular domain-like | F: PF09496 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
L [auth U] | PF20994 | CENPU protein (CENPU) | CENPU protein | - | Family |
N [auth Z] | PF09447 | Cnl2/NKP2 family protein (Cnl2_NKP2) | Cnl2/NKP2 family protein | - | Family |
B [auth G] | PF16211 | C-terminus of histone H2A (Histone_H2A_C) | C-terminus of histone H2A | - | Family |
B [auth G] | PF00125 | Core histone H2A/H2B/H3/H4 (Histone) | Core histone H2A/H2B/H3/H4 | - | Domain |
C [auth H] | PF20993 | CENPH protein (CENPH) | CENPH protein | - | Family |
C [auth H] | PF00125 | Core histone H2A/H2B/H3/H4 (Histone) | Core histone H2A/H2B/H3/H4 | - | Domain |
H [auth N] | PF05238 | Kinetochore protein CHL4 like (CENP-N) | Kinetochore protein CHL4 like | - | Family |
I [auth O] | PF09496 | Cenp-O kinetochore centromere component (CENP-O) | Cenp-O kinetochore centromere component | - | Family |