6QCG
PCNA complex with Cdt1 N-terminal PIP-box peptide
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | DNA clamp | 8032799 | 3000780 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | DNA clamp | 8032796 | 3000780 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | DNA clamp | 8032796 | 3000780 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | DNA clamp | 8032799 | 3000780 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | DNA clamp | 8032799 | 3000780 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | DNA clamp | 8032796 | 3000780 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | DNA clamp | 8032796 | 3000780 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | DNA clamp | 8032799 | 3000780 | SCOP2B (2022-06-29) |
E [auth D] | SCOP2B Superfamily | DNA clamp | 8032796 | 3000780 | SCOP2B (2022-06-29) |
E [auth D] | SCOP2B Superfamily | DNA clamp | 8032799 | 3000780 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | DNA clamp | 8032799 | 3000780 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | DNA clamp | 8032796 | 3000780 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PCNA_N | e6qcgA2 | A: a+b two layers | X: DNA clamp (From Topology) | H: DNA clamp (From Topology) | T: DNA clamp | F: PCNA_N | ECOD (1.6) |
A | PCNA_C | e6qcgA1 | A: a+b two layers | X: DNA clamp (From Topology) | H: DNA clamp (From Topology) | T: DNA clamp | F: PCNA_C | ECOD (1.6) |
B [auth C] | PCNA_N | e6qcgC2 | A: a+b two layers | X: DNA clamp (From Topology) | H: DNA clamp (From Topology) | T: DNA clamp | F: PCNA_N | ECOD (1.6) |
B [auth C] | PCNA_C | e6qcgC1 | A: a+b two layers | X: DNA clamp (From Topology) | H: DNA clamp (From Topology) | T: DNA clamp | F: PCNA_C | ECOD (1.6) |
C [auth B] | PCNA_N | e6qcgB1 | A: a+b two layers | X: DNA clamp (From Topology) | H: DNA clamp (From Topology) | T: DNA clamp | F: PCNA_N | ECOD (1.6) |
C [auth B] | PCNA_C | e6qcgB2 | A: a+b two layers | X: DNA clamp (From Topology) | H: DNA clamp (From Topology) | T: DNA clamp | F: PCNA_C | ECOD (1.6) |
D [auth E] | PCNA_N | e6qcgE1 | A: a+b two layers | X: DNA clamp (From Topology) | H: DNA clamp (From Topology) | T: DNA clamp | F: PCNA_N | ECOD (1.6) |
D [auth E] | PCNA_C | e6qcgE2 | A: a+b two layers | X: DNA clamp (From Topology) | H: DNA clamp (From Topology) | T: DNA clamp | F: PCNA_C | ECOD (1.6) |
E [auth D] | PCNA_N | e6qcgD1 | A: a+b two layers | X: DNA clamp (From Topology) | H: DNA clamp (From Topology) | T: DNA clamp | F: PCNA_N | ECOD (1.6) |
E [auth D] | PCNA_C | e6qcgD2 | A: a+b two layers | X: DNA clamp (From Topology) | H: DNA clamp (From Topology) | T: DNA clamp | F: PCNA_C | ECOD (1.6) |
F | PCNA_N | e6qcgF2 | A: a+b two layers | X: DNA clamp (From Topology) | H: DNA clamp (From Topology) | T: DNA clamp | F: PCNA_N | ECOD (1.6) |
F | PCNA_C | e6qcgF1 | A: a+b two layers | X: DNA clamp (From Topology) | H: DNA clamp (From Topology) | T: DNA clamp | F: PCNA_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.70.10.10 | Alpha Beta | Box | Proliferating Cell Nuclear Antigen | CATH (4.3.0) | |
B [auth C] | 3.70.10.10 | Alpha Beta | Box | Proliferating Cell Nuclear Antigen | CATH (4.3.0) | |
C [auth B] | 3.70.10.10 | Alpha Beta | Box | Proliferating Cell Nuclear Antigen | CATH (4.3.0) | |
D [auth E] | 3.70.10.10 | Alpha Beta | Box | Proliferating Cell Nuclear Antigen | CATH (4.3.0) | |
E [auth D] | 3.70.10.10 | Alpha Beta | Box | Proliferating Cell Nuclear Antigen | CATH (4.3.0) | |
F | 3.70.10.10 | Alpha Beta | Box | Proliferating Cell Nuclear Antigen | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02747 | Proliferating cell nuclear antigen, C-terminal domain (PCNA_C) | Proliferating cell nuclear antigen, C-terminal domain | N-terminal and C-terminal domains of PCNA are topologically identical. Three PCNA molecules are tightly associated to form a closed ring encircling duplex DNA. | Domain | |
PF00705 | Proliferating cell nuclear antigen, N-terminal domain (PCNA_N) | Proliferating cell nuclear antigen, N-terminal domain | N-terminal and C-terminal domains of PCNA are topologically identical. Three PCNA molecules are tightly associated to form a closed ring encircling duplex DNA. | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR046938 | DNA clamp superfamily | Homologous Superfamily | |
IPR022648 | Proliferating cell nuclear antigen, PCNA, N-terminal | Domain | |
IPR000730 | Proliferating cell nuclear antigen, PCNA | Family | |
IPR022649 | Proliferating cell nuclear antigen, PCNA, C-terminal | Domain | |
IPR022659 | Proliferating cell nuclear antigen, PCNA, conserved site | Conserved Site | |
IPR038090 | DNA replication factor Cdt1, C-terminal WH domain superfamily | Homologous Superfamily | |
IPR032054 | DNA replication factor Cdt1, C-terminal | Domain | |
IPR045173 | DNA replication factor Cdt1 | Family | |
IPR014939 | CDT1 Geminin-binding domain-like | Domain | |
IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |