6Q7J
GH3 exo-beta-xylosidase (XlnD) in complex with xylobiose aziridine activity based probe
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PF14310 | e6q7jB3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF14310 | ECOD (1.6) |
A [auth B] | PF00933 | e6q7jB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF00933 | ECOD (1.6) |
A [auth B] | PF01915 | e6q7jB2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Beta-D-glucan exohydrolase, C-terminal domain (From Topology) | T: Beta-D-glucan exohydrolase, C-terminal domain | F: PF01915 | ECOD (1.6) |
B [auth A] | PF14310 | e6q7jA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF14310 | ECOD (1.6) |
B [auth A] | PF00933 | e6q7jA2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF00933 | ECOD (1.6) |
B [auth A] | PF01915 | e6q7jA3 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Beta-D-glucan exohydrolase, C-terminal domain (From Topology) | T: Beta-D-glucan exohydrolase, C-terminal domain | F: PF01915 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A] | PF00933 | Glycosyl hydrolase family 3 N terminal domain (Glyco_hydro_3) | Glycosyl hydrolase family 3 N terminal domain | - | Domain |
A [auth B], B [auth A] | PF01915 | Glycosyl hydrolase family 3 C-terminal domain (Glyco_hydro_3_C) | Glycosyl hydrolase family 3 C-terminal domain | This domain is involved in catalysis and may be involved in binding beta-glucan [1]. This domain is found associated with Pfam:PF00933. | Domain |
A [auth B], B [auth A] | PF14310 | Fibronectin type III-like domain (Fn3-like) | Fibronectin type III-like domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth A] | IPR001764 | Glycoside hydrolase, family 3, N-terminal | Domain |
A [auth B], B [auth A] | IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily |
A [auth B], B [auth A] | IPR002772 | Glycoside hydrolase family 3 C-terminal domain | Domain |
A [auth B], B [auth A] | IPR044993 | Beta-D-xylosidase | Family |
A [auth B], B [auth A] | IPR036962 | Glycoside hydrolase, family 3, N-terminal domain superfamily | Homologous Superfamily |
A [auth B], B [auth A] | IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
A [auth B], B [auth A] | IPR026891 | Fibronectin type III-like domain | Domain |
A [auth B], B [auth A] | IPR036881 | Glycoside hydrolase family 3 C-terminal domain superfamily | Homologous Superfamily |
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
A [auth B], B [auth A] | PCA | Parent Component: GLN :  AA0031 :  2-pyrrolidone-5-carboxylic acid (Gln) MOD:00040 , 2-pyrrolidone-5-carboxylic acid (Glu) MOD:00420 |