6PDW
Msp1-substrate complex in closed conformation
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | Vps4_C_C_1 | e6pdwB1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: Vps4_C_C_1 | ECOD (1.6) |
A [auth B] | Sigma54_activat | e6pdwB2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
B [auth C] | Vps4_C_C_1 | e6pdwC2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: Vps4_C_C_1 | ECOD (1.6) |
B [auth C] | Sigma54_activat | e6pdwC1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
C [auth D] | Vps4_C_C_1 | e6pdwD2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: Vps4_C_C_1 | ECOD (1.6) |
C [auth D] | Sigma54_activat | e6pdwD1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
D [auth E] | Vps4_C_C_1 | e6pdwE2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: Vps4_C_C_1 | ECOD (1.6) |
D [auth E] | Sigma54_activat | e6pdwE1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
E [auth F] | Vps4_C_C_1 | e6pdwF2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: Vps4_C_C_1 | ECOD (1.6) |
E [auth F] | Sigma54_activat | e6pdwF1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth C], C [auth D], D [auth E], E [auth F] | PF17862 | AAA+ lid domain (AAA_lid_3) | AAA+ lid domain | This entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. | Domain |
A [auth B], B [auth C], C [auth D], D [auth E], E [auth F] | PF00004 | ATPase family associated with various cellular activities (AAA) (AAA) | ATPase family associated with various cellular activities (AAA) | AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. | Domain |