Alpha-beta TCR Binding to Neoantigen KQWLVWLFL Presented by HLA-A206


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
D [auth G]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8003766 3000071 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8003766 3000071 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
H [auth J]Carot_Ne6p64J1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Carot_NECOD (v294.2)
F [auth E]Carot_Ne6p64E1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Carot_NECOD (v294.2)
G [auth I]Carot_Ne6p64I1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Carot_NECOD (v294.2)
E [auth D]Carot_Ne6p64D1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Carot_NECOD (v294.2)
D [auth G]Carot_Ne6p64G1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Carot_NECOD (v294.2)
BCarot_Ne6p64B1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Carot_NECOD (v294.2)
C [auth F]Carot_Ne6p64F1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Carot_NECOD (v294.2)
ACarot_Ne6p64A1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Carot_NECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
F [auth E],
H [auth J]
TR 302TIL TR-BETA-2 Homo sapiens (human) TRBV12-3*01, TRBJ2-3*01, TRBC2*01, TRBC2*02 V-DOMAIN V-BETA, C-DOMAIN C-BETA-2 TR TR-ALPHA_BETA-2 IMGT (202617-0)
E [auth D],
G [auth I]
TR 302TIL TR-ALPHA Homo sapiens (human) TRAV38-2/DV8*01, TRAJ33*01, TRAC*01 V-DOMAIN V-ALPHA, C-DOMAIN C-ALPHA TR TR-ALPHA_BETA-2 IMGT (202617-0)
B,
D [auth G]
MH1 HLA-A*0206 B2M Homo sapiens (human) B2M*01, B2M*02 C-LIKE-DOMAIN C-LIKE MH MH1-ALPHA_B2M IMGT (202617-0)
A,
C [auth F]
MH1 HLA-A*0206 I-ALPHA Homo sapiens (human) HLA-A*0206, HLA-A*0210, HLA-A*0251, HLA-A*0257, HLA-A*0279 G-DOMAIN G-ALPHA1, G-DOMAIN G-ALPHA2, C-LIKE-DOMAIN C-LIKE MH MH1-ALPHA_B2M IMGT (202617-0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B,
D [auth G]
PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domainDomain
A,
C [auth F]
PF00129Class I Histocompatibility antigen, domains alpha 1 and 2 (MHC_I)Class I Histocompatibility antigen, domains alpha 1 and 2Domain
A,
C [auth F]
PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth C],
J [auth H]
Neoantigen peptide KQWLVWLFL
F [auth E],
H [auth J]
302TIL TCR beta chain---
E [auth D],
G [auth I]
302TIL TCR alpha chain---
B,
D [auth G]
Beta-2-microglobulin
A,
C [auth F]
MHC class I antigen

InterPro: Protein Family Classification InterPro Database Homepage

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
I [auth C],
J [auth H]
Q5VTY9
B,
D [auth G]
P61769