6ORF

Crystal structure of SpGH29

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AF5_F8_type_C_2e6orfA2 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Galactose-binding domain-likeF: F5_F8_type_C_2ECOD (1.6)
AAlpha_L_fucose6orfA1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Alpha_L_fucosECOD (1.6)
BF5_F8_type_C_2e6orfB2 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Galactose-binding domain-likeF: F5_F8_type_C_2ECOD (1.6)
BAlpha_L_fucose6orfB1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Alpha_L_fucosECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF01120Alpha-L-fucosidase (Alpha_L_fucos)Alpha-L-fucosidase- Domain
A, B
PF22633NedA-like, galactose-binding domain (F5_F8_type_C_2)NedA-like, galactose-binding domainThis galactose-binding domain is found in Sialidase from Micromonospora viridifaciens (NedA), which releases sialic acids for use as carbon and energy sources. This domain shows a jelly-roll topology [3].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
SpGH29 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR000421Coagulation factor 5/8, C-terminal domainDomain
A, B
IPR038081CalX-like domain superfamilyHomologous Superfamily
A, B
IPR017853Glycoside hydrolase superfamilyHomologous Superfamily
A, B
IPR008979Galactose-binding-like domain superfamilyHomologous Superfamily
A, B
IPR000933Glycoside hydrolase, family 29Family