6OAI
Crystal structure of P[6] rotavirus vp8* complexed with LNFPI
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6oaia_ | All beta proteins | Concanavalin A-like lectins/glucanases | Concanavalin A-like lectins/glucanases | automated matches | automated matches | (Human rotavirus A ) [TaxId: 10941 ], | SCOPe (2.08) |
B | d6oaib_ | All beta proteins | Concanavalin A-like lectins/glucanases | Concanavalin A-like lectins/glucanases | automated matches | automated matches | (Human rotavirus A ) [TaxId: 10941 ], | SCOPe (2.08) |
C | d6oaic_ | All beta proteins | Concanavalin A-like lectins/glucanases | Concanavalin A-like lectins/glucanases | automated matches | automated matches | (Human rotavirus A ) [TaxId: 10941 ], | SCOPe (2.08) |
D | d6oaid_ | All beta proteins | Concanavalin A-like lectins/glucanases | Concanavalin A-like lectins/glucanases | automated matches | automated matches | (Human rotavirus A ) [TaxId: 10941 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8095381 | 3000120 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8095381 | 3000120 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8095381 | 3000120 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8095381 | 3000120 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | VP4_haemagglut | e6oaiA1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: VP4_haemagglut | ECOD (1.6) |
B | VP4_haemagglut | e6oaiB1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: VP4_haemagglut | ECOD (1.6) |
C | VP4_haemagglut | e6oaiC1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: VP4_haemagglut | ECOD (1.6) |
D | VP4_haemagglut | e6oaiD1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: VP4_haemagglut | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.120.200 | Mainly Beta | Sandwich | Jelly Rolls | CATH (utative) | |
B | 2.60.120.200 | Mainly Beta | Sandwich | Jelly Rolls | CATH (utative) | |
C | 2.60.120.200 | Mainly Beta | Sandwich | Jelly Rolls | CATH (utative) | |
D | 2.60.120.200 | Mainly Beta | Sandwich | Jelly Rolls | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00426 | Outer Capsid protein VP4 (Hemagglutinin) Concanavalin-like domain (VP4_haemagglut) | Outer Capsid protein VP4 (Hemagglutinin) Concanavalin-like domain | This entry represents the N-terminal concanavalin-like domain from the VP4 protein of rotavirus. | Domain |