Annotations: 6NYJ

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
L	AAA	e6nyjL1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA	ECOD (v295)
K	AAA	e6nyjK1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA	ECOD (v295)
J	AAA	e6nyjJ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA	ECOD (v295)
I	AAA	e6nyjI1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA	ECOD (v295)
H	AAA	e6nyjH1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA	ECOD (v295)
G	AAA	e6nyjG1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA	ECOD (v295)
F	AAA	e6nyjF1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA	ECOD (v295)
E	AAA	e6nyjE1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA	ECOD (v295)
D	AAA	e6nyjD1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA	ECOD (v295)
C	AAA	e6nyjC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA	ECOD (v295)
B	AAA	e6nyjB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA	ECOD (v295)
A	AAA	e6nyjA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA	ECOD (v295)

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	Vacuolating cytotoxin autotransporter	toxin activity	-	cell surface cellular anatomical structure extracellular region periplasmic space cell outer membrane external encapsulating structure membrane cell envelope outer membrane

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR006315	Outer membrane autotransporter barrel domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR003842	Vacuolating cytotoxin, beta-helical domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR036709	Autotransporter beta-domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR005546	Autotransporter beta-domain	Domain

Chains	Resource Link	Group	Subgroup	Protein
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Adventitious Membrane Proteins: Alpha-helical Pore-forming Toxins.	VacA vacuolating cytotoxin A oligomeric assembly OA-1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

6NYJ | pdb_00006nyj