Annotations: 6NYF

Helicobacter pylori Vacuolating Cytotoxin A Oligomeric Assembly 1 (OA-1)

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Membrane Protein Annotation: mpstruc

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	AAA	e6nyfF1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA	ECOD (v295.2)
E	AAA	e6nyfE1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA	ECOD (v295.2)
D	AAA	e6nyfD1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA	ECOD (v295.2)
C	AAA	e6nyfC1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA	ECOD (v295.2)
B	AAA	e6nyfB1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA	ECOD (v295.2)
A	Binary_toxB	e6nyfA01	A: alpha arrays	X: Rossmann-like	H: Rossmann-related	T: FAD/NAD(P)-binding domain	F: Binary_toxB	ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Vacuolating cytotoxin autotransporter	-	-	cell surface cellular anatomical structure extracellular region periplasmic space cell outer membrane external encapsulating structure membrane cell envelope outer membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR006315	Outer membrane autotransporter barrel domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR064010	Vacuolating cytotoxin autotransporter VacA, C-terminal domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR003842	Vacuolating cytotoxin, beta-helical domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR036709	Autotransporter beta-domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR005546	Autotransporter beta-domain	Domain

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B, C, D, E A, B, C, D, E, F	OPM	Monotopic/peripheral	All beta monotopic/peripheral	Pectate lyase-like	Vacuolating cytotoxin

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, B, C, D, E A, B, C, D, E, F	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Adventitious Membrane Proteins: Alpha-helical Pore-forming Toxins.	VacA vacuolating cytotoxin A oligomeric assembly OA-1