Annotations: 6NDJ

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Type 2 solute binding protein-like	8058187	3000083	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	DEATH domain	8089254	3000069	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	DEATH domain	8089254	3000069	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Type 2 solute binding protein-like	8058187	3000083	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PYRIN	e6ndjA3	A: alpha arrays	X: DEATH domain	H: DEATH domain (From Topology)	T: DEATH domain	F: PYRIN	ECOD (1.6)
A	SBP_bac_1_C	e6ndjA1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II (From Topology)	H: Periplasmic binding protein-like II (From Topology)	T: Periplasmic binding protein-like II	F: SBP_bac_1_C	ECOD (1.6)
A	SBP_bac_1_N_1	e6ndjA2	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II (From Topology)	H: Periplasmic binding protein-like II (From Topology)	T: Periplasmic binding protein-like II	F: SBP_bac_1_N_1	ECOD (1.6)
B	PYRIN	e6ndjB3	A: alpha arrays	X: DEATH domain	H: DEATH domain (From Topology)	T: DEATH domain	F: PYRIN	ECOD (1.6)
B	SBP_bac_1_C	e6ndjB2	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II (From Topology)	H: Periplasmic binding protein-like II (From Topology)	T: Periplasmic binding protein-like II	F: SBP_bac_1_C	ECOD (1.6)
B	SBP_bac_1_N_1	e6ndjB1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II (From Topology)	H: Periplasmic binding protein-like II (From Topology)	T: Periplasmic binding protein-like II	F: SBP_bac_1_N_1	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF01547	Bacterial extracellular solute-binding protein (SBP_bac_1)	Bacterial extracellular solute-binding protein	-	Family
A, B	PF02758	PAAD/DAPIN/Pyrin domain (PYRIN)	PAAD/DAPIN/Pyrin domain	This domain is predicted to contain 6 alpha helices and to have the same fold as the Pfam:PF00531 domain. This similarity may mean that this is a protein-protein interaction domain.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Maltose/maltodextrin-binding periplasmic protein, NACHT, LRR and PYD domains-containing protein 6 chimera	transporter activity carbohydrate transmembrane transporter activity transmembrane transporter activity oligosaccharide binding binding disaccharide binding carbohydrate binding maltose binding protein-macromolecule adaptor activity molecular adaptor activity signaling adaptor activity RNA binding double-stranded RNA binding organic cyclic compound binding transporter activity carbohydrate transmembrane transporter activity transmembrane transporter activity oligosaccharide binding binding disaccharide binding carbohydrate binding maltose binding protein-macromolecule adaptor activity molecular adaptor activity signaling adaptor activity RNA binding double-stranded RNA binding organic cyclic compound binding nucleic acid binding lipid binding lipopolysaccharide binding carbohydrate derivative binding molecular condensate scaffold activity vasopressin receptor activity peptide receptor activity molecular transducer activity G protein-coupled receptor activity G protein-coupled peptide receptor activity transmembrane signaling receptor activity signaling receptor activity pattern recognition receptor activity adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding ribonucleotide binding small molecule binding lipoteichoic acid binding peptide binding	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process cell chemotaxis chemotaxis response to external stimulus cellular response to chemical stimulus taxis response to chemical cell migration cell motility cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process cell chemotaxis chemotaxis response to external stimulus cellular response to chemical stimulus taxis response to chemical cell migration cell motility locomotion localization transport carbohydrate transport oligosaccharide transport disaccharide transport establishment of localization maltose transport polysaccharide localization dextrin transport macromolecule localization maltodextrin transmembrane transport polysaccharide transport response to disaccharide response to oxygen-containing compound detection of maltose stimulus detection of stimulus response to carbohydrate detection of chemical stimulus detection of disaccharide stimulus response to maltose detection of carbohydrate stimulus regulation of localization multicellular organismal process regulation of body fluid levels regulation of biological process secretion by tissue regulation of transport secretion regulation of mucus secretion biological regulation mucus secretion regulation of secretion body fluid secretion regulation of multicellular organismal process regulation of biological quality positive regulation of response to biotic stimulus regulation of cellular process pattern recognition receptor signaling pathway toll-like receptor signaling pathway negative regulation of biological process regulation of signal transduction response to biotic stimulus cell communication immune response-activating signaling pathway positive regulation of immune response regulation of immune system process signal transduction positive regulation of immune system process innate immune response-activating signaling pathway immune response response to other organism regulation of innate immune response regulation of response to stimulus defense response to other organism regulation of pattern recognition receptor signaling pathway positive regulation of defense response activation of innate immune response regulation of immune response regulation of toll-like receptor signaling pathway activation of immune response regulation of defense response regulation of response to biotic stimulus biological process involved in interspecies interaction between organisms regulation of response to external stimulus signaling negative regulation of signaling positive regulation of biological process negative regulation of cell communication positive regulation of response to stimulus positive regulation of response to external stimulus immune response-regulating signaling pathway regulation of response to stress innate immune response negative regulation of cellular process response to external biotic stimulus regulation of signaling positive regulation of innate immune response defense response negative regulation of response to stimulus defense response to symbiont negative regulation of signal transduction negative regulation of toll-like receptor signaling pathway negative regulation of immune system process immune system process regulation of cell communication positive regulation of cell communication positive regulation of signal transduction response to interleukin-18 response to cytokine positive regulation of response to cytokine stimulus cytokine-mediated signaling pathway cellular response to cytokine stimulus positive regulation of cellular process cell surface receptor signaling pathway cellular response to interleukin-18 regulation of cytokine-mediated signaling pathway response to peptide interleukin-18-mediated signaling pathway regulation of response to cytokine stimulus regulation of interleukin-18-mediated signaling pathway positive regulation of interleukin-18-mediated signaling pathway positive regulation of cytokine-mediated signaling pathway positive regulation of signaling regulation of inflammatory response positive regulation of inflammatory response inflammatory response neutrophil-mediated killing of symbiont cell disruption of cell in another organism myeloid leukocyte mediated immunity biological process involved in symbiotic interaction defense response to bacterium neutrophil mediated immunity response to bacterium leukocyte mediated immunity biological process involved in interaction with symbiont killing of cells of another organism neutrophil-mediated killing of bacterium neutrophil-mediated killing of gram-positive bacterium neutrophil mediated cytotoxicity defense response to Gram-positive bacterium leukocyte mediated cytotoxicity immune effector process killing by host of symbiont cells disruption of anatomical structure in another organism cell killing acute inflammatory response acute inflammatory response to antigenic stimulus inflammatory response to antigenic stimulus negative regulation of intracellular signal transduction negative regulation of canonical NF-kappaB signal transduction intracellular signal transduction regulation of intracellular signal transduction intracellular signaling cassette canonical NF-kappaB signal transduction regulation of canonical NF-kappaB signal transduction pyroptotic inflammatory response regulation of MAPK cascade negative regulation of ERK1 and ERK2 cascade MAPK cascade ERK1 and ERK2 cascade regulation of ERK1 and ERK2 cascade negative regulation of MAPK cascade defense response to virus antiviral innate immune response response to virus wound healing response to wounding negative regulation of inflammatory response negative regulation of inflammatory response to antigenic stimulus negative regulation of immune response regulation of inflammatory response to antigenic stimulus negative regulation of response to external stimulus negative regulation of defense response regulation of type II interferon production type II interferon production cellular biosynthetic process negative regulation of cellular metabolic process cytokine production regulation of cytokine production negative regulation of type II interferon production negative regulation of macromolecule metabolic process regulation of biosynthetic process cellular metabolic process negative regulation of metabolic process regulation of cellular metabolic process negative regulation of cytokine production regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process negative regulation of cellular biosynthetic process regulation of cellular biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process negative regulation of multicellular organismal process regulation of metabolic process multicellular organismal-level homeostasis homeostatic process modulation by host of symbiont process homeostasis of number of cells host-mediated regulation of intestinal microbiota composition cellular component biogenesis cellular component assembly inflammasome-mediated signaling pathway canonical inflammasome complex assembly cytoplasmic pattern recognition receptor signaling pathway intracellular receptor signaling pathway cellular component organization NLRP6 inflammasome complex assembly protein-containing complex assembly cellular component organization or biogenesis protein-containing complex organization necroptotic process programmed necrotic cell death cell death programmed cell death catabolic process autophagy regulation of catabolic process regulation of autophagy cellular catabolic process regulation of cellular catabolic process process utilizing autophagic mechanism protein complex oligomerization protein homooligomerization	ATPase dependent transmembrane transport complex protein-containing complex plasma membrane protein complex membrane plasma membrane membrane protein complex cellular anatomical entity transporter complex ATP-binding cassette (ABC) transporter complex cell periphery transmembrane transporter complex ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing maltose transport complex periplasmic space ATPase dependent transmembrane transport complex protein-containing complex plasma membrane protein complex membrane plasma membrane membrane protein complex cellular anatomical entity transporter complex ATP-binding cassette (ABC) transporter complex cell periphery transmembrane transporter complex ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing maltose transport complex periplasmic space outer membrane-bounded periplasmic space cell envelope membrane-bounded organelle intracellular anatomical structure nuclear membrane nucleus intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle nuclear envelope organelle membrane non-membrane-bounded organelle cytoplasm cytosol canonical inflammasome complex NLRP6 inflammasome complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR006061	Solute-binding family 1, conserved site	Conserved Site
A, B	IPR006060	Maltose/Cyclodextrin ABC transporter, substrate-binding protein	Family
A, B	IPR006059	Bacterial-type extracellular solute-binding protein	Family
A, B	IPR004020	DAPIN domain	Domain
A, B	IPR007111	NACHT nucleoside triphosphatase	Domain
A, B	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A, B	IPR011029	Death-like domain superfamily	Homologous Superfamily
A, B	IPR041267	NACHT, LRR and PYD domains-containing protein, helical domain HD2	Domain
A, B	IPR041075	NOD1/2, winged helix domain	Domain
A, B	IPR032675	Leucine-rich repeat domain superfamily	Homologous Superfamily
A, B	IPR050637	NLRP family, innate immunity and inflammation regulators	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: P59044	benign prostatic hyperplasia Hashimoto thyroiditis brain aneurysm heart disease endogenous depression uterine corpus leiomyoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.