6MKE

Crystal Structure of Peptidylprolyl Isomerase from Naegleria fowleri with bound FK506

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d6mkea_	Alpha and beta proteins (a+b)	FKBP-like	FKBP-like	automated matches	automated matches	Brain eating amoeba (Naegleria fowleri ) [TaxId: 5763 ],	SCOPe (2.08)
B	d6mkeb_	Alpha and beta proteins (a+b)	FKBP-like	FKBP-like	automated matches	automated matches	Brain eating amoeba (Naegleria fowleri ) [TaxId: 5763 ],	SCOPe (2.08)
D	d6mked_	Alpha and beta proteins (a+b)	FKBP-like	FKBP-like	automated matches	automated matches	Brain eating amoeba (Naegleria fowleri ) [TaxId: 5763 ],	SCOPe (2.08)
C	d6mkec_	Alpha and beta proteins (a+b)	FKBP-like	FKBP-like	automated matches	automated matches	Brain eating amoeba (Naegleria fowleri ) [TaxId: 5763 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	FKBP immunophilin/proline isomerase	8065249	4001062	SCOP2 (2021-05-27)
A	SCOP2 Superfamily	Rotamase-like	8065250	3000622	SCOP2 (2021-05-27)
B	SCOP2B Superfamily	Rotamase-like	8065250	3000622	SCOP2B (2021-05-27)
D	SCOP2B Superfamily	Rotamase-like	8065250	3000622	SCOP2B (2021-05-27)
C	SCOP2B Superfamily	Rotamase-like	8065250	3000622	SCOP2B (2021-05-27)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF00254	e6mkeA1	A: a+b two layers	X: FKBP-like	H: FKBP-like	T: FKBP-like	F: PF00254	ECOD (1.6)
B	PF00254	e6mkeB1	A: a+b two layers	X: FKBP-like	H: FKBP-like	T: FKBP-like	F: PF00254	ECOD (1.6)
D	PF00254	e6mkeD1	A: a+b two layers	X: FKBP-like	H: FKBP-like	T: FKBP-like	F: PF00254	ECOD (1.6)
C	PF00254	e6mkeC1	A: a+b two layers	X: FKBP-like	H: FKBP-like	T: FKBP-like	F: PF00254	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.10.50.40	Alpha Beta	Roll	Chitinase A	domain 3	CATH (utative)
B	3.10.50.40	Alpha Beta	Roll	Chitinase A	domain 3	CATH (utative)
D	3.10.50.40	Alpha Beta	Roll	Chitinase A	domain 3	CATH (utative)
C	3.10.50.40	Alpha Beta	Roll	Chitinase A	domain 3	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase (FKBP_C)	FKBP-type peptidyl-prolyl cis-trans isomerase	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Peptidylprolyl isomerase	isomerase activity catalytic activity, acting on a protein peptidyl-prolyl cis-trans isomerase activity catalytic activity cis-trans isomerase activity	-	membrane-bounded organelle intracellular anatomical structure organelle subcompartment membrane cellular anatomical entity intracellular membrane-bounded organelle endomembrane system sarcoplasm endoplasmic reticulum subcompartment intracellular organelle bounding membrane of organelle organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum membrane-bounded organelle intracellular anatomical structure organelle subcompartment membrane cellular anatomical entity intracellular membrane-bounded organelle endomembrane system sarcoplasm endoplasmic reticulum subcompartment intracellular organelle bounding membrane of organelle organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum sarcoplasmic reticulum sarcoplasmic reticulum membrane cytoplasm organelle membrane endoplasmic reticulum membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR046357	Peptidyl-prolyl cis-trans isomerase domain superfamily	Homologous Superfamily
A, B, C, D	IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.